Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Secale_20cereale_20[genbank_20GCA_5F900079665.1_202017-02-07] 1,581,707 sequences; 1,684,931,674 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq683858 118 9e-25 seq140481 104 2e-20 seq163697 100 2e-19 seq766387 98.7 8e-19 seq520819 98.7 8e-19 seq1120901 96.9 3e-18 seq604467 96.9 3e-18 seq252845 96.9 3e-18 seq1539717 95.1 1e-17 seq1120446 91.5 1e-16 seq242598 89.7 4e-16 seq881384 84.2 2e-14 seq450625 84.2 2e-14 seq246382 80.6 2e-13 seq657503 77.0 3e-12 seq137355 77.0 3e-12 seq213552 75.2 9e-12 seq97779 73.4 3e-11 seq84538 73.4 3e-11 >seq683858 Length=968 Score = 118 bits (130), Expect = 9e-25 Identities = 123/160 (77%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 ||||||||||| |||||||| ||| | | ||||| || ||| ||||| ||| | | Sbjct 56 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCCGCCTTACAG 114 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | || ||| ||| | |||||||| ||||||| |||| |||||||||||||| Sbjct 115 CCTTGCTTCCCATTGTCATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCAT 174 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 | |||||||||||||||||||||||||||| || | |||| Sbjct 175 GCGGACTTGACGTCATCCCCACCTTCCTCCAGTATCTCAC 214 >seq140481 Length=1441 Score = 104 bits (114), Expect = 2e-20 Identities = 122/161 (76%), Gaps = 3/161 (2%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACT-ACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 ||||||||||| |||||||| | | ||| | ||||| || ||| ||||| ||| | Sbjct 376 CGAGTTGCAGAGAACAATCCGAATTGACGCAAT-CTTTCCGG-ATTCGCTCCGCCTTACA 319 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || || ||| | |||||||| ||||||| |||| ||||||||||||| Sbjct 318 GCCTTGCTTGCCATTGTCATTGCCATTGTACCACGTGTGTGGCCCAGCCCATAAGGGCCA 259 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || || ||||||||||||||||||||||||| || | |||| Sbjct 258 TGTGGCCTTGACGTCATCCCCACCTTCCTCCAGTATCTCAC 218 >seq163697 Length=705 Score = 100 bits (110), Expect = 2e-19 Identities = 119/160 (74%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 ||||||||||| |||||||| ||| | | | || | ||||| ||||| ||| | | Sbjct 572 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCATT-TCGGATTCGCTCCACCTTACAG 514 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | || ||| ||| | |||||||| ||||||| |||| |||||||||||||| Sbjct 513 CCTTGCTTCCCATTGTCATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCAT 454 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 | || | |||||||||||||||||| |||| || | |||| Sbjct 453 GCGGCCATGACGTCATCCCCACCTTGCTCCAGTATCTCAC 414 >seq766387 Length=389 Score = 98.7 bits (108), Expect = 8e-19 Identities = 118/159 (74%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 ||||||||||| |||||||| ||| | | ||||| || ||| ||||| || | | Sbjct 56 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCCATCTTACAG 114 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | || ||| ||| | ||||||| | ||||| | || |||||||||||||| Sbjct 115 CCTTGCTTCCCATTGTCATTGCCATTGTGGCATGTGTGTGGACCAGCCCATAAGGGCCAT 174 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCA 160 | |||||||||||||||||||||||||||| || | ||| Sbjct 175 GCGGACTTGACGTCATCCCCACCTTCCTCCAGTATCTCA 213 >seq520819 Length=647 Score = 98.7 bits (108), Expect = 8e-19 Identities = 120/161 (75%), Gaps = 4/161 (2%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACT-TTCTGGGATTAGCTCCCCCTCGCG 60 ||||||||||| ||||| || || ||| |||| || | ||||| ||||| ||| | Sbjct 430 CGAGTTGCAGAGAACAATTCGAAC--CGAGGCACTCTTTTCGGATTCGCTCCGCCTTACA 373 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || | ||| | |||||||| ||||| | | || ||||||||||||| Sbjct 372 GCCTTGCTTNNCATTGTCATTGCCATTGTAGCACGTGCGT-GTCCAGCCCATAAGGGCCA 314 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || |||||||||||||||||||||||||||| || | |||| Sbjct 313 TGCGGACTTGACGTCATCCCCACCTTCCTCCAGTATCTCAC 273 >seq1120901 Length=555 Score = 96.9 bits (106), Expect = 3e-18 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 83 CCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCA 142 |||||||| ||||||| |||| ||||||||||||||| ||||||||||||||||||| Sbjct 26 CCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCATGCGGACTTGACGTCATCCCCA 85 Query 143 CCTTCCTCCGGTTTGTCA 160 ||||||||| || | ||| Sbjct 86 CCTTCCTCCAGTATATCA 103 >seq604467 Length=3714 Score = 96.9 bits (106), Expect = 3e-18 Identities = 112/150 (75%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 ||||||| ||| |||||||| ||| | | ||||| || ||| ||||| ||| | | Sbjct 1366 CGAGTTGTAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCCGCCTTACAG 1424 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | || || ||| | |||||||| ||||||| |||| |||||||||| | | Sbjct 1425 CCTTGCTTTCCATTGTCATTTCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGTCGT 1484 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCC 151 | |||||||||||||||||||||||||||| Sbjct 1485 GCGGACTTGACGTCATCCCCACCTTCCTCC 1514 >seq252845 Length=1321 Score = 96.9 bits (106), Expect = 3e-18 Identities = 118/160 (74%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||| |||||| |||||| | |||| | | ||||| || ||| |||| ||| | | Sbjct 378 CGAGATGCAGAGAACAATCTGAACTAAGGCAATCTTTCAGG-ATTCGCTCTGCCTTACAG 320 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | || ||| ||| | |||||||| || |||| ||| |||||||||||||| Sbjct 319 CCTTGCTTCCCAATGTCATTGCCATTGTAGCACATGTGTGGCCTAGCCCATAAGGGCCAT 260 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 | | |||||||||||||||||||||||||| || | |||| Sbjct 259 GCGAACTTGACGTCATCCCCACCTTCCTCCAGTATCTCAC 220 >seq1539717 Length=601 Score = 95.1 bits (104), Expect = 1e-17 Identities = 117/159 (74%), Gaps = 1/159 (1%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 ||||||| ||| || ||||| ||| | | ||||| || ||| ||||| ||| | | Sbjct 432 CGAGTTGTAGAGAACCATCCGAACTTAGGCAATCTTTCCGG-ATTCGCTCCGCCTTACAG 374 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | || ||| | | |||||||||| ||||||| |||| ||||||| || ||| Sbjct 373 CCTTGCTTCCCATTATCATTACCATTGTAGCACGTGTGTGGCCCAGCCCATAATGGTCAT 314 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCA 160 | ||||||||||||||||| |||||||||| || | ||| Sbjct 313 GCGGACTTGACGTCATCCCTACCTTCCTCCAGTATTTCA 275 >seq1120446 Length=350 Score = 91.5 bits (100), Expect = 1e-16 Identities = 109/149 (73%), Gaps = 1/149 (1%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 ||||||||||| |||||||| |||| | | |||| || ||| ||||| ||| | | Sbjct 1 CGAGTTGCAGAGAACAATCCGAACTAAGGCAATCTTTACGG-ATTCGCTCCGCCTTACAG 59 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | || ||| || | |||||||| ||||||| |||| |||||||||||||| Sbjct 60 CCTTGCTTCCCATTGGCATTTCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCAT 119 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTC 150 ||||||||||||||||||||||| Sbjct 120 NNNNNNTTGACGTCATCCCCACCTTCCTC 148 >seq242598 Length=2943 Score = 89.7 bits (98), Expect = 4e-16 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 88 GTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTC 147 |||| ||||||| |||| ||||||||||||||| ||||||||| |||||||||||||| Sbjct 2638 GTATCACGTGTGTGGCCCAGCCCATAAGGGCCATGCGGACTTGACATCATCCCCACCTTC 2697 Query 148 CTCCGGTTTGTCAC 161 |||| || | |||| Sbjct 2698 CTCCAGTATCTCAC 2711 >seq881384 Length=479 Score = 84.2 bits (92), Expect = 2e-14 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 83 CCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCA 142 |||||||| ||||||| |||| |||||||||| |||| ||||||||||||||||||| Sbjct 347 CCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGTCATGCGGACTTGACGTCATCCCCA 288 Query 143 CCTTCCTCCGGTTTGTCAC 161 ||||||| || | |||| Sbjct 287 AGTTCCTCCAGTATCTCAC 269 >seq450625 Length=375 Score = 84.2 bits (92), Expect = 2e-14 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 83 CCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCA 142 |||||||| ||||||| |||| ||||||||||||||| ||||||||||||||||||| Sbjct 312 CCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCATGCGGACTTGACGTCATCCCCA 371 Query 143 CCTT 146 |||| Sbjct 372 CCTT 375 >seq246382 Length=1754 Score = 80.6 bits (88), Expect = 2e-13 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 83 CCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCA 142 |||||||| ||||||| |||| ||||||||||||||| ||||| |||||||||||| Sbjct 118 CCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCATGCAGACTTAACGTCATCCCCA 59 Query 143 CCTTCCTCCGGT 154 ||||| ||| || Sbjct 58 CCTTCTTCCAGT 47 >seq657503 Length=536 Score = 77.0 bits (84), Expect = 3e-12 Identities = 60/72 (83%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 83 CCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCA 142 |||||||| ||||||| ||| | |||||||||||||| ||||||||| |||||| | Sbjct 62 CCATTGTAGCACGTGTGTGGCCGAAACCATAAGGGCCATGCAGACTTGACGCCATCCCTA 121 Query 143 CCTTCCTCCGGT 154 ||||||||| || Sbjct 122 CCTTCCTCCAGT 133 >seq137355 Length=1349 Score = 77.0 bits (84), Expect = 3e-12 Identities = 110/155 (71%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||| ||| | ||| ||| |||||| |||||||| Sbjct 684 CGAGTTGCAGCCTGCAATCAAAACTGAGGACGGGTTTTTGGAGTTAGCTTACCCTCGCGA 743 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| ||| | |||||||| || |||| ||| |||||||| ||| Sbjct 744 GATCGCGACCCTTTGTCTCGCCCATTGTAGCACATGTGTCTCCCAGGGCATAAGGGGCAT 803 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTT 156 || |||||| | |||| | | ||||||||||| || Sbjct 804 GATGACTTGGCCTCATACTCTCCTTCCTCCGGCTT 838 >seq213552 Length=2071 Score = 75.2 bits (82), Expect = 9e-12 Identities = 49/54 (91%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 108 CCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||||||||||||||| ||||||||| |||||||||||||||||| || | |||| Sbjct 1558 CCCATAAGGGCCATGCGGACTTGACATCATCCCCACCTTCCTCCAGTATCTCAC 1611 >seq97779 Length=9239 Score = 73.4 bits (80), Expect = 3e-11 Identities = 58/69 (84%), Gaps = 2/69 (3%) Strand=Plus/Minus Query 83 CCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCA 142 |||||||| | ||||| || | |||||||||| |||| ||||||||||||||| ||| Sbjct 1397 CCATTGTAGTAAGTGTG--GCTCAGCCCATAAGGGGCATGCGGACTTGACGTCATCTCCA 1340 Query 143 CCTTCCTCC 151 ||||||||| Sbjct 1339 CCTTCCTCC 1331 >seq84538 Length=5655 Score = 73.4 bits (80), Expect = 3e-11 Identities = 52/60 (87%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 102 GCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 |||| ||||||||||||||| ||||||||| ||||||||||||||||| || | |||| Sbjct 1343 GCCCAGCCCATAAGGGCCATGCGGACTTGACATCATCCCCACCTTCCTCTAGTATCTCAC 1402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409625720790