Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Secale_20cereale_20[genbank_20GCA_5F900079665.1_202017-02-07] 1,581,707 sequences; 1,684,931,674 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq425426 116 8e-24 seq1484280 105 1e-20 seq243206 102 2e-19 seq48609 98.7 2e-18 seq647475 96.9 7e-18 seq377884 96.9 7e-18 seq360512 95.1 3e-17 seq384462 87.8 4e-15 seq558315 86.0 1e-14 seq554169 86.0 1e-14 seq316799 86.0 1e-14 seq1309724 84.2 5e-14 seq1360953 80.6 6e-13 seq661181 80.6 6e-13 seq575282 78.8 2e-12 seq692256 77.0 7e-12 seq528610 77.0 7e-12 >seq425426 Length=1431 Score = 116 bits (128), Expect = 8e-24 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 ||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| || Sbjct 890 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 949 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 |||||||| ||||| ||||| || |||||||||||| ||| ||||| || | ||| Sbjct 950 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 1009 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284 ||| | ||| |||| | |||| ||| ||| ||||| || |||||||||| || Sbjct 1010 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTAC 1069 Query 285 GCATCCCCATCGTACACCG 303 ||| | |||| ||| || Sbjct 1070 GCAGGCTCATCAAACAGCG 1088 >seq1484280 Length=2972 Score = 105 bits (116), Expect = 1e-20 Identities = 103/132 (78%), Gaps = 1/132 (1%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | || |||| ||||| ||| ||||| || | ||| |||| || Sbjct 2651 AAAAGAAGTTGACGACCCATAGA-CCTTCCACCTCCACGCGACATTGCTCCGTCAGGCTT 2709 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||| | || ||||| ||||||||||||| |||| ||| ||||||||||||||| Sbjct 2710 TCGCCCATNGCGGAAAATTCCCCACTGCTGCCTCCTGTAGAAGTCTGGACCGTGTCTCAG 2769 Query 201 TTCCAATGTGGG 212 | || |||||| Sbjct 2770 TCTCAGTGTGGG 2781 >seq243206 Length=1854 Score = 102 bits (112), Expect = 2e-19 Identities = 102/131 (78%), Gaps = 1/131 (1%) Strand=Plus/Minus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | |||||| ||||| ||| ||||| | | || |||| || Sbjct 962 AAAAGAAGTTGACGACCCGTAGG-CCTTCCACCTCCACGCGGCATTGCCCCGTCAGGCTT 904 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || ||||| |||||||||||||||||||||| ||| || |||||||| Sbjct 903 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCATGTCTCAG 844 Query 201 TTCCAATGTGG 211 | ||| ||||| Sbjct 843 TCCCAGTGTGG 833 >seq48609 Length=5053 Score = 98.7 bits (108), Expect = 2e-18 Identities = 112/148 (76%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | || ||| ||||| ||| |||| | | ||| || | || Sbjct 3434 AAAAGAAGTTGACGACCCATAGG-CCTTCCACCTCAACGCGGCATTGCTCCGTCGGGCTT 3376 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 | |||||||| || ||||| |||||||||||||||||||||| ||| |||||||| || Sbjct 3375 TTGTCCATTGCGGAAAATTCC-CACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTGAG 3317 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGA 228 | ||| ||||| || | ||||||| || Sbjct 3316 TCCCAGTGTGGCTGATCATCCTCTCGGA 3289 >seq647475 Length=1349 Score = 96.9 bits (106), Expect = 7e-18 Identities = 111/148 (75%), Gaps = 1/148 (1%) Strand=Plus/Minus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | |||||| | | |||| | |||| | | ||| || | || Sbjct 219 AAAAGAAGTTGACGACCCGTAGGCCTTCCATC-TCCACGTGGCATTGCTCCGTCGGGCTT 161 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 || |||||| || ||||| |||||||||||||||||||||| ||| |||||| |||| Sbjct 160 TCTCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTATCAG 101 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGA 228 | ||| ||||| || | ||||||| || Sbjct 100 TACCAGTGTGGCTGATCATCCTCTCGGA 73 >seq377884 Length=612 Score = 96.9 bits (106), Expect = 7e-18 Identities = 143/202 (71%), Gaps = 7/202 (3%) Strand=Plus/Plus Query 82 AAAGAAGTTTACAATCCGTAGAA----CCTTCATCCTTCACGCTACTTGGCTGGTTCAGA 137 ||||| ||||||| |||| | ||||| || |||||| | | ||||| || | Sbjct 100 AAAGAGCTTTACAA---GTAGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGG 156 Query 138 CTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCT 197 || ||| |||||| |||| ||||| |||||||||| ||| | ||||| || ||||||| Sbjct 157 CTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCATGGGAGTCCGGGTCGTGTCT 216 Query 198 CAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCC 257 |||| ||| ||||| || | ||| ||| | ||| |||| | |||| ||| ||| Sbjct 217 CAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCC 276 Query 258 GTTACCCCGCCTACTACCTAAT 279 ||| | || |||| ||||| Sbjct 277 TTTAACTAACCAACTATCTAAT 298 >seq360512 Length=3013 Score = 95.1 bits (104), Expect = 3e-17 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 ||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| || Sbjct 2906 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 2965 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGG 211 |||||||| ||||| ||||| || |||||||||||| ||| ||||| Sbjct 2966 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGG 3012 >seq384462 Length=533 Score = 87.8 bits (96), Expect = 4e-15 Identities = 122/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 ||||| || |||| | | | ||||| || || ||| |||||| || | ||||| || Sbjct 171 CCTTCTTCACTCACACGATATTGCTGGATCGTGCTTTCGCCCATTGTCCCAGATTCCCCA 112 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 || ||||| ||||| ||||| || |||||||||||| ||| ||||| || | ||| Sbjct 111 CTTCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 52 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACC 275 ||| | ||| |||| | |||| ||| ||| ||||| || |||||| Sbjct 51 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACC 1 >seq558315 Length=3598 Score = 86.0 bits (94), Expect = 1e-14 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 127 GCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTT 186 ||||| || | || ||| |||||| |||| ||||| |||||||||| ||||| ||||| Sbjct 4 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCC 63 Query 187 GGACCGTGTCTCAGTTCCAATGTGG 211 || |||||||||||| ||| ||||| Sbjct 64 GGGCCGTGTCTCAGTCCCAGTGTGG 88 >seq554169 Length=5018 Score = 86.0 bits (94), Expect = 1e-14 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 133 TCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCG 192 |||| || ||| |||||| || |||| |||| ||||||||||||||||| ||| ||| Sbjct 4732 TCAGGCTTTCGCCCATTGCGGAAAATTCGCCACTACTGCCTCCCGTAGGAGTCTGGGCCG 4673 Query 193 TGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 ||||||||| ||| ||||| || | |||||| Sbjct 4672 TGTCTCAGTCCCAGTGTGGCTGATCATCCTCT 4641 >seq316799 Length=427 Score = 86.0 bits (94), Expect = 1e-14 Identities = 106/144 (74%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 68 TTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGG 127 ||| ||| | | |||||||||| | | || ||| ||||| ||| ||| | | | | Sbjct 145 TTTCTTCTCCGAGAAAAGAAGTTGATGACCCATAGG-CCTTCCACCTCCACACGGCATTG 87 Query 128 CTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTG 187 || | || || ||| |||||| || ||||| || ||||||||||| ||||||| || Sbjct 86 CTCTGTTAGGCTTTCGCCCATTGCAAAAAATTCCCCATTGCTGCCTCCCATAGGAGTCTG 27 Query 188 GACCGTGTCTCAGTTCCAATGTGG 211 | |||||||||||| ||| ||||| Sbjct 26 GGCCGTGTCTCAGTCCCAGTGTGG 3 >seq1309724 Length=340 Score = 84.2 bits (92), Expect = 5e-14 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 ||||| || |||||| | | ||| | || | || || ||| || |||| | || || Sbjct 171 CCTTCTTCACTCACGCGATATTGCTAGATCGGGCTTTCACCCACTGTCCAAGAATCGCCA 112 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 |||||||| ||||| ||||| || |||||||||||| ||| ||||| || | ||| Sbjct 111 CTGCTGCCACCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 52 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACC 275 ||| | ||| |||| | |||| ||| ||| ||||| || |||||| Sbjct 51 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACC 1 >seq1360953 Length=350 Score = 80.6 bits (88), Expect = 6e-13 Identities = 98/131 (75%), Gaps = 2/131 (2%) Strand=Plus/Minus Query 82 AAAGAAGTTTACAATCCGTAGAACC-TTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 ||||| ||||||| | ||| || ||| || |||| | | ||||| || | || Sbjct 132 AAAGAGCTTTACAAGCGGTATTGCCCTTCTTCACTCACATGATATTGCTGGATCGGGCTT 73 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| ||||| |||| ||||| |||||||||| ||||| ||||| || ||||||||||| Sbjct 72 TCGCCCATTT-CCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAG 14 Query 201 TTCCAATGTGG 211 | ||| ||||| Sbjct 13 TCCCAGTGTGG 3 >seq661181 Length=561 Score = 80.6 bits (88), Expect = 6e-13 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 157 ATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGAC 216 ||||| |||||||||||||||||||||| || |||||||||||| ||| ||||| || Sbjct 560 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGAGCCGTGTCTCAGTCCCAGTGTGGCTGAT 501 Query 217 CTTCCTCTCAGA 228 | ||||||| || Sbjct 500 CATCCTCTCGGA 489 >seq575282 Length=1599 Score = 78.8 bits (86), Expect = 2e-12 Identities = 107/148 (72%), Gaps = 1/148 (1%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||| ||||| | | |||| | ||||| ||| || || | | ||| ||||||| Sbjct 32 AAAATAAGTTGATGACCCGTGGG-CCTTCCACCTCCAGGCGGCATTGCTTCGTCAGACTT 90 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| || ||| || ||||| |||||||||||||| ||||| || || || |||||||| Sbjct 91 TCGCCCGTTGCAGAAAATTCCCCACTGCTGCCTCCCATAGGATTTCGGGCCATGTCTCAG 150 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGA 228 | | | | ||| || | ||||||| || Sbjct 151 TCCGAGTCTGGCTGATCATCCTCTCGGA 178 >seq692256 Length=918 Score = 77.0 bits (84), Expect = 7e-12 Identities = 50/55 (91%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 157 ATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGG 211 ||||| |||||||||||||||||||||| ||| |||||||||||| ||| ||||| Sbjct 917 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGG 863 >seq528610 Length=15903 Score = 77.0 bits (84), Expect = 7e-12 Identities = 80/104 (77%), Gaps = 1/104 (1%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | |||||| ||||| ||| ||||| | | ||| |||| || Sbjct 9 AAAAGAAGTTGACGACCCGTAGG-CCTTCCACCTCCACGCGGCATTGCTCCGTCAGGCTT 67 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGT 184 ||| |||||| || ||||| |||| ||||||||||||||||| Sbjct 68 TCGCCCATTGCGGAAAATTCCCCACTTCTGCCTCCCGTAGGAGT 111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1051894715584