Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq9 87.8 7e-12 >seq9 Length=58970307 Score = 87.8 bits (96), Expect = 7e-12 Identities = 91/119 (76%), Gaps = 3/119 (3%) Strand=Plus/Minus Query 222424 GCGGCCCTCGGCGTGGCCTACCTCCACTCGCGCACC---CCGTCCATCATCCACCGCGAC 222480 ||||| | ||| |||||||||||||| || | || ||| ||||||||||||| ||| Sbjct 47331348 GCGGCGCGCGGGCTGGCCTACCTCCACGAGCTCGCCGACCCGCCCATCATCCACCGGGAC 47331289 Query 222481 CTCAAGTCCAGCAACCTGCTCGTGGGCGACTCCCTGTCGATGAAGGTGGCCGACTTTGG 222539 |||||||||||||| | ||| ||| ||| ||| || ||||| |||||||| || Sbjct 47331288 GTCAAGTCCAGCAACATCCTCATGGACGAGCACCTCACGGCCAAGGTCGCCGACTTCGG 47331230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084729978937926