Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq337 672 0.0 seq14 672 0.0 seq4 464 7e-126 seq7 352 3e-92 seq1 179 4e-40 >seq337 Length=135516 Score = 672 bits (744), Expect = 0.0 Identities = 741/987 (75%), Gaps = 0/987 (0%) Strand=Plus/Minus Query 159803 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTCCTG 159862 |||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || || Sbjct 1626 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 1567 Query 159863 ATGATCCCAACTCTGTTGGCAGCAACTATCTGCTTCATCGTCGCCTTCATCGCTGCTCCC 159922 |||||||| || | ||| | |||||| | || || ||||||||||||||||||| Sbjct 1566 ATGATCCCTACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCT 1507 Query 159923 CCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTACGGTAACAAC 159982 || || || || ||||| || ||||| || || ||||||| | | || || ||||| Sbjct 1506 CCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAAT 1447 Query 159983 ATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTCTATCCCATT 160042 || || |||||||| || |||| |||| || || || | || || || || ||| Sbjct 1446 ATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATT 1387 Query 160043 TGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCTTTCCAACTCGTAGTC 160102 |||||||| ||||| | || || ||| | || || || ||||||| | || | || Sbjct 1386 TGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTT 1327 Query 160103 TTCCACTTCCTGATCGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCGT 160162 | |||||| | | || | | ||||||||||||||||||||||| || |||| Sbjct 1326 CTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 1267 Query 160163 CTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCTGCTTCTGCT 160222 || |||||||| || ||||| ||||||||| || ||||| || || |||||| ||||| Sbjct 1266 CTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 1207 Query 160223 GTATTCCTCGTCTACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCTCTTGGTATC 160282 || ||| | | || || | ||||| || |||||| |||| ||||||| | || || Sbjct 1206 GTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATA 1147 Query 160283 TCTGGTACTTTTAACTATATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCCG 160342 ||||||||||| |||| |||| |||||||||| || || ||||| |||||||||||||| Sbjct 1146 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCCA 1087 Query 160343 TTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTGTTCTCTGCTATGCATGGA 160402 || |||||| | ||||| ||||| |||||||| || || || ||| |||||||||||| Sbjct 1086 TTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGT 1027 Query 160403 TCTCTGGTTACTTCTAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAGAACTATGGT 160462 || |||| || |||||| | |||| || || || |||| |||||| || | ||| Sbjct 1026 TCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGGGT 967 Query 160463 TACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCTACTTCGGT 160522 ||||| || |||||||| ||||||||||| ||||| || || || || || || || ||| Sbjct 966 TACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTTGGT 907 Query 160523 CGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTCTGCACTTCTTCCTCGCT 160582 || || |||||||||||||| || |||||||| || ||| | ||||||||| | ||| Sbjct 906 CGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCT 847 Query 160583 GCTTGGCCTGTTGTTGGAATCTGGTTCACTGCCCTTGGTGTTTCTACCATGGCATTCAAT 160642 ||||||||||| || || |||||||||||||| | ||| || ||| ||||||||||| Sbjct 846 GCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAAC 787 Query 160643 CTCAATGGTTTCAACTTCAACCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACACT 160702 || ||||| ||||| |||||||| || | | || | ||||| | ||| | || ||| Sbjct 786 CTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACT 727 Query 160703 TGGGCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGCT 160762 ||||| || | | ||||| ||| ||| || |||||||| |||||||| ||||| ||| Sbjct 726 TGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCT 667 Query 160763 CACAACTTCCCTCTCGACCTTGCTGCT 160789 |||||||||||||| ||||| |||||| Sbjct 666 CACAACTTCCCTCTAGACCTAGCTGCT 640 Score = 614 bits (680), Expect = 6e-171 Identities = 748/1012 (74%), Gaps = 7/1012 (1%) Strand=Plus/Plus Query 161527 GACGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTT 161586 ||||||||| | | | || |||||||||||||| || ||||| || || | || ||| Sbjct 9002 GACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGCCTATTGCTCTTT 9061 Query 161587 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGG 161646 || ||||||| | ||| | || |||||| |||| || || ||||| | || ||| Sbjct 9062 CCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTTGTAACTTCTTGG 9121 Query 161647 TATACCCATGGACTCGCTAGTTCCTATCTTGAGGGT-GCAAATTTTCTTA-CAGCGGCAG 161704 |||||||||||| | |||||||||||| | || ||| |||| ||||||| | ||||| | Sbjct 9122 TATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACCGCGGCGG 9179 Query 161705 TTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTTCTCTGGGGTCCTGAGGCTC 161764 || |||||| || | | | | || ||| | | || || ||||| || || || | Sbjct 9180 TTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCAC 9239 Query 161765 AAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACG 161824 | |||||||| | ||| ||| | || || || |||| |||||| || ||||| | Sbjct 9240 AGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTCGCTCTCCATG 9299 Query 161825 GGGCTTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGAACTTGCTCG-TCTTATCGGT 161883 ||||||| || || || || |||||| | ||||| |||||||||||||| ||| || | Sbjct 9300 GGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAAT 9359 Query 161884 ATCCGTCCTTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTT 161943 | || ||||| ||||| ||| | ||||||||||| || || |||||||| ||| || Sbjct 9360 -TGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTTTGTTTCCGTATTC 9418 Query 161944 CTCATATATCCTCTGGGACAGTCGTCCTGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCT 162003 || || ||||| |||||||| || |||||||| ||||| ||||| || || ||| Sbjct 9419 CTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCT 9478 Query 162004 ATTTTCAGGTTCTTACTTTTCCTACAAGGTTTCCACAATTGGACGCTTAATCCGTTCCAC 162063 || || | || | |||||| | ||||| || || ||||||||| | || || || || Sbjct 9479 ATATTTCGATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCAT 9538 Query 162064 ATGATGGGTGTCGCAGGTATCTTGGGTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACT 162123 |||||||| || || || | || || | ||| |||| | ||||| || || | || Sbjct 9539 ATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTATCCATGGGGCTACC 9598 Query 162124 GTTGAAAACACGCTCTACCAAGATGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCT 162183 || |||||||| || | | |||||||||| |||||||| ||| |||||| || | Sbjct 9599 GTAGAAAACACTCTATTCGAAGATGGTGATGGTGCAAATACCTTCCGCGCTTTTAACCCA 9658 Query 162184 ACGCAAGAGGAGGAGACTTACTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTC 162243 || |||| || || ||||| || ||||| ||||| ||||| || ||||| || ||||| Sbjct 9659 ACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTT 9718 Query 162244 GGTATTGCTTTTAGTAATAAGCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATG 162303 ||| |||||||| ||||| |||||||| |||||||||||||| || || ||||||| Sbjct 9719 GGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACC 9778 Query 162304 GGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGAC 162363 ||| | |||| ||| |||| || | |||| || ||||| || || ||||| || ||| Sbjct 9779 GGTTTATGGATGAGTGCTATTGGCGTAGTTGGCCTGGCTCTGAACCTACGTGCCTATGAC 9838 Query 162364 TTTGTATCTCAGGAGATTCGTGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAG 162423 || || || ||||| || ||||||||||| |||||||||||||| || ||||||||||| Sbjct 9839 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 9898 Query 162424 AATATCCTCTTGAATGAAGGTCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAG 162483 ||||| || || || || ||| ||||||| ||| ||||| | ||||| || ||||| Sbjct 9899 AATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAA 9958 Query 162484 AACTTTGTATTCCCTGAGGAAGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535 || || ||||||||||||| ||||| || | || ||||| || | ||||| Sbjct 9959 AATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT-TTAATGG 10009 >seq14 Length=147140 Score = 672 bits (744), Expect = 0.0 Identities = 741/987 (75%), Gaps = 0/987 (0%) Strand=Plus/Minus Query 159803 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTCCTG 159862 |||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || || Sbjct 81971 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 81912 Query 159863 ATGATCCCAACTCTGTTGGCAGCAACTATCTGCTTCATCGTCGCCTTCATCGCTGCTCCC 159922 |||||||| || | ||| | |||||| | || || ||||||||||||||||||| Sbjct 81911 ATGATCCCTACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCT 81852 Query 159923 CCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTACGGTAACAAC 159982 || || || || ||||| || ||||| || || ||||||| | | || || ||||| Sbjct 81851 CCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAAT 81792 Query 159983 ATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTCTATCCCATT 160042 || || |||||||| || |||| |||| || || || | || || || || ||| Sbjct 81791 ATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATT 81732 Query 160043 TGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCTTTCCAACTCGTAGTC 160102 |||||||| ||||| | || || ||| | || || || ||||||| | || | || Sbjct 81731 TGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTT 81672 Query 160103 TTCCACTTCCTGATCGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCGT 160162 | |||||| | | || | | ||||||||||||||||||||||| || |||| Sbjct 81671 CTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 81612 Query 160163 CTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCTGCTTCTGCT 160222 || |||||||| || ||||| ||||||||| || ||||| || || |||||| ||||| Sbjct 81611 CTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 81552 Query 160223 GTATTCCTCGTCTACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCTCTTGGTATC 160282 || ||| | | || || | ||||| || |||||| |||| ||||||| | || || Sbjct 81551 GTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATA 81492 Query 160283 TCTGGTACTTTTAACTATATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCCG 160342 ||||||||||| |||| |||| |||||||||| || || ||||| |||||||||||||| Sbjct 81491 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCCA 81432 Query 160343 TTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTGTTCTCTGCTATGCATGGA 160402 || |||||| | ||||| ||||| |||||||| || || || ||| |||||||||||| Sbjct 81431 TTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGT 81372 Query 160403 TCTCTGGTTACTTCTAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAGAACTATGGT 160462 || |||| || |||||| | |||| || || || |||| |||||| || | ||| Sbjct 81371 TCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGGGT 81312 Query 160463 TACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCTACTTCGGT 160522 ||||| || |||||||| ||||||||||| ||||| || || || || || || || ||| Sbjct 81311 TACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTTGGT 81252 Query 160523 CGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTCTGCACTTCTTCCTCGCT 160582 || || |||||||||||||| || |||||||| || ||| | ||||||||| | ||| Sbjct 81251 CGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCT 81192 Query 160583 GCTTGGCCTGTTGTTGGAATCTGGTTCACTGCCCTTGGTGTTTCTACCATGGCATTCAAT 160642 ||||||||||| || || |||||||||||||| | ||| || ||| ||||||||||| Sbjct 81191 GCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAAC 81132 Query 160643 CTCAATGGTTTCAACTTCAACCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACACT 160702 || ||||| ||||| |||||||| || | | || | ||||| | ||| | || ||| Sbjct 81131 CTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACT 81072 Query 160703 TGGGCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGCT 160762 ||||| || | | ||||| ||| ||| || |||||||| |||||||| ||||| ||| Sbjct 81071 TGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCT 81012 Query 160763 CACAACTTCCCTCTCGACCTTGCTGCT 160789 |||||||||||||| ||||| |||||| Sbjct 81011 CACAACTTCCCTCTAGACCTAGCTGCT 80985 Score = 612 bits (678), Expect = 2e-170 Identities = 749/1012 (74%), Gaps = 9/1012 (1%) Strand=Plus/Plus Query 161527 GACGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTT 161586 ||||||||| | | | || |||||||||||||| || ||||| || || | || ||| Sbjct 89673 GACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGCCTATTGCTCTTT 89732 Query 161587 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGG 161646 || ||||||| | ||| | || |||||| |||| || || ||||| | || ||| Sbjct 89733 CCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTTGTAACTTCTTGG 89792 Query 161647 TATACCCATGGACTCGCTAGTTCCTATCTTGAGGGT-GCAAATTTTCTTA-CAGCGGCAG 161704 |||||||||||| | |||||||||||| | || ||| |||| ||||||| | ||||| | Sbjct 89793 TATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACCGCGGCGG 89850 Query 161705 TTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTTCTCTGGGGTCCTGAGGCTC 161764 || |||||| || | | | | || ||| | | || || ||||| || || || | Sbjct 89851 TTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCAC 89910 Query 161765 AAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACG 161824 | |||||||| | ||| ||| | || || || |||| |||||| || ||||| | Sbjct 89911 AGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTCGCTCTCCATG 89970 Query 161825 GGGCTTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGAACTTGCTCG-TCTTATCGGT 161883 ||||||| || || || || |||||| | ||||| |||||||||||||| ||| || | Sbjct 89971 GGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAAT 90030 Query 161884 ATCCGTCCTTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTT 161943 | || ||||| ||||| ||| | ||||||||||| || || |||||||| ||| || Sbjct 90031 -TGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTTTGTTTCCGTATTC 90089 Query 161944 CTCATATATCCTCTGGGACAGTCGTCCTGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCT 162003 || || ||||| |||||||| || |||||||| ||||| ||||| || || ||| Sbjct 90090 CTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCT 90149 Query 162004 ATTTTCAGGTTCTTACTTTTCCTACAAGGTTTCCACAATTGGACGCTTAATCCGTTCCAC 162063 || ||| | || | |||||| | ||||| || || ||||||||| | || || || || Sbjct 90150 ATATTC-GATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCAT 90208 Query 162064 ATGATGGGTGTCGCAGGTATCTTGGGTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACT 162123 |||||||| || || || | || || | ||| |||| | ||||| || || | || Sbjct 90209 ATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTATCCATGGGGCTACC 90268 Query 162124 GTTGAAAACACGCTCTACCAAGATGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCT 162183 || |||||||| || | | |||||||||| |||||||| ||| |||||| || | Sbjct 90269 GTAGAAAACACTCTATTCGAAGATGGTGATGGTGCAAATACCTTCCGCGCTTTTAACCCA 90328 Query 162184 ACGCAAGAGGAGGAGACTTACTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTC 162243 || |||| || || ||||| || ||||| ||||| ||||| || ||||| || ||||| Sbjct 90329 ACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTT 90388 Query 162244 GGTATTGCTTTTAGTAATAAGCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATG 162303 ||| |||||||| ||||| |||||||| |||||||||||||| || || ||||||| Sbjct 90389 GGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACC 90448 Query 162304 GGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGAC 162363 ||| | |||| ||| |||| || | |||| || ||||| || || ||||| || ||| Sbjct 90449 GGTTTATGGATGAGTGCTATTGGCGTAGTTGGCCTGGCTCTGAACCTACGTGCCTATGAC 90508 Query 162364 TTTGTATCTCAGGAGATTCGTGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAG 162423 || || || ||||| || ||||||||||| |||||||||||||| || ||||||||||| Sbjct 90509 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 90568 Query 162424 AATATCCTCTTGAATGAAGGTCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAG 162483 ||||| || || || || ||| ||||||| ||| ||||| | ||||| || ||||| Sbjct 90569 AATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGC-TCAGATCAGCCTCATGAA 90627 Query 162484 AACTTTGTATTCCCTGAGGAAGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535 || || ||||||||||||| ||||| || | || ||||| || | ||||| Sbjct 90628 AATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT-TTAATGG 90678 >seq4 Length=40407879 Score = 464 bits (514), Expect = 7e-126 Identities = 621/858 (72%), Gaps = 4/858 (0%) Strand=Plus/Plus Query 161679 GGGTGCAAATTTTCTTACAGCGGCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCT 161738 |||| |||||| | || ||||| ||| |||||| || | | | | || ||| | Sbjct 27919937 GGGTTGAAATTTCTTAACCGCGGCGGTTTCCACTCCTGCCAATAGTTTAGCACACTCTTT 27919996 Query 161739 TCTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGATCCAACTTGGGGG 161798 | || || ||||| || || || || |||||||| | ||| ||| | || || Sbjct 27919997 GTTGCTACTATGGGGCCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGG 27920056 Query 161799 ACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTGGATTCATGCTTCGTCA 161858 || |||| ||| || || ||||| |||||||| || || || | |||||| | ||||| Sbjct 27920057 TCTGTGGACTTT-GTCGCTCTCCATGGGGCTTTTGCACTAATAAGTTTCATGTTACGTCA 27920115 Query 161859 GTTTGAACTTGCTCG-TCTTATCGGTATCCGTCCTTACAATGCTATTGCTTTCTCTGGTC 161917 |||||||||||||| ||| || | | || ||||| ||||| ||| | |||||| ||| Sbjct 27920116 ATTTGAACTTGCTCGGTCTGTTCAAT-TGCGGCCTTATAATGCAATTTCATTCTCTAGTC 27920174 Query 161918 CTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGACAGTCGTCCTGGTTCT 161977 | || || |||||||| ||| || || || ||||| |||||||| || ||||||| Sbjct 27920175 CAATCGCAGTTTTTGTTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCT 27920234 Query 161978 TCGCGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTACTTTTCCTACAAGGTTTCC 162037 | ||||| ||||| || || ||||| || | || | |||||| | ||||| || | Sbjct 27920235 TTGCGCCGAGTTTTGGCGTAGCAGCTATATTTCGATTTATCCTTTTCTTCCAAGGATTTC 27920294 Query 162038 ACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGTATCTTGGGTGGTGCTT 162097 | ||||||||| | || || || || |||||||| || || | | || |||| ||| Sbjct 27920295 ATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCAGAGTATTAGGTGTAGCTC 27920354 Query 162098 TGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTACCAAGATGGTGAACAAG 162157 |||| | ||||| || || | ||||| |||||||| || | |||||||||| | Sbjct 27920355 TGCTATGCGCTATCCATGGGGCTACTGTAGAAAACACTCTATTTGAAGATGGTGATGGTG 27920414 Query 162158 CAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTTACTCGATGGTTACTG 162217 ||||||| || |||||| || | || ||||| || || ||||| || ||||| | || Sbjct 27920415 CAAATACCTTTCGCGCTTTTAACCCAACTCAAGATGAAGAAACTTATTCAATGGTCATTG 27920474 Query 162218 CGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATAAGCGTTGGTTGCATT 162277 | ||||| || ||||| || ||||| ||| |||||||| ||||| | |||||| |||| Sbjct 27920475 CTAACCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACATTGGTTACATT 27920534 Query 162278 TCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGAC 162337 |||||||||| || || ||||||| || | |||| ||| |||| || | |||| Sbjct 27920535 TCTTTATGCTATTTGTACCCGTCACCAGTTTATGGATGAGTGCTATTGGCGTAGTTGGCT 27920594 Query 162338 TCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTCGTGCAGCGGAGGATC 162397 | ||||| || || | ||| || ||||| | || ||||| || ||||||||||| |||| Sbjct 27920595 TGGCTCTGAACCTACATGCCTATGACTTCATTTCCCAGGAAATCCGTGCAGCGGAAGATC 27920654 Query 162398 CTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAGGTCTTCGTGCATGGT 162457 |||||||||| || ||||||||||| ||||| || || || | ||| || |||| ||| Sbjct 27920655 CTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACCAGGGTATTTGTGCGTGGA 27920714 Query 162458 TGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGGAAGTTCTGCCTAGAG 162517 ||||| | ||||| || ||||| || || ||||||||||||| ||||| || | | Sbjct 27920715 TGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCATGTG 27920774 Query 162518 GTAACGCACTGTGAATGG 162535 | ||||| || | ||||| Sbjct 27920775 GAAACGCTCT-TTAATGG 27920791 >seq7 Length=35964315 Score = 352 bits (390), Expect = 3e-92 Identities = 354/460 (77%), Gaps = 0/460 (0%) Strand=Plus/Plus Query 160328 ATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTGTTC 160387 ||| |||||||||| || |||||| | ||||| ||||| |||||||| || || || ||| Sbjct 24459257 ATCATTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTC 24459316 Query 160388 TCTGCTATGCATGGATCTCTGGTTACTTCTAGTCTCGTCAGAGAGACGACAGAAACTGAG 160447 |||||||||||| || |||| || | |||| | |||| || || || |||| |||| Sbjct 24459317 AGTGCTATGCATGGTTCCTTGGTAACCTATAGTTTGATCAGGGAAACCACTGAAAATGAG 24459376 Query 160448 TCCCAGAACTATGGTTACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTCGCAGCA 160507 || || | |||||||| || |||||||| |||| || ||| ||||| || || || Sbjct 24459377 TCTGCTAATGAGGGTTACAAATTTGGTCAAGAAGAAGGGATTTATAACATTGTGGCTGCT 24459436 Query 160508 CATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTCTG 160567 ||||| || || ||||| || |||||||||||||| || |||||||| | ||| | Sbjct 24459437 CATGGTTATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTTGTTCTTTA 24459496 Query 160568 CACTTCTTCCTCGCTGCTTGGCCTGTTGTTGGAATCTGGTTCACTGCCCTTGGTGTTTCT 160627 ||||||||| | |||||||||||||| || || |||||||||||||| | ||| || | Sbjct 24459497 CACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGT 24459556 Query 160628 ACCATGGCATTCAATCTCAATGGTTTCAACTTCAACCAGTCCATCTTGGACAACCAAGGA 160687 || ||||||||||| || ||||||||||| |||||||| || | | || | ||||| Sbjct 24459557 ACTATGGCATTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGT 24459616 Query 160688 CAAGTTCTGAACACTTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGAAGTCATG 160747 | ||| | || |||||||| || | ||||| ||| ||| || |||||||| ||| Sbjct 24459617 CGCGTTATTAATACTTGGGCTGATATCACCAACCGTGCTAATCTTGGTATGGAAGTAATG 24459676 Query 160748 CACGAGCGTAACGCTCACAACTTCCCTCTCGACCTTGCTG 160787 ||||| ||||| ||||||||||||||||| ||||| |||| Sbjct 24459677 CACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTG 24459716 >seq1 Length=42145699 Score = 179 bits (198), Expect = 4e-40 Identities = 202/269 (75%), Gaps = 1/269 (0%) Strand=Plus/Plus Query 162172 GCTTTTGACTCTACGCAAGAGGAGGAGACTTACTCGATGGTTACTGCGAACCGTTTCTGG 162231 |||||| || | || |||| || || ||||| || ||||| | ||| ||||| || ||| Sbjct 27067121 GCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCATTGCTAACCGCTTGTGG 27067180 Query 162232 TCACAGATCTTCGGTATTGCTTTTAGTAATAAGCGTTGGTTGCATTTCTTTATGCTCTTC 162291 || || || || ||| |||||||| ||||| ||||||| |||||||||||||| || Sbjct 27067181 TCTCAAATATTTGGTGTTGCTTTTTCCAATAAATGTTGGTTACATTTCTTTATGCTATTT 27067240 Query 162292 GTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTTAATCTT 162351 || ||||||| | | | |||| | | |||| || | | || || ||||| || || Sbjct 27067241 GTACCCGTCACCGAT-TATGGATGACTGCTATTGGCGTAGTAGGCCTGGCTCTGAACCTA 27067299 Query 162352 CGTGCTTACGACTTTGTATCTCAGGAGATTCGTGCAGCGGAGGATCCTGAATTTGAAACC 162411 ||||| || ||||| | || || || || ||||||||||| |||||||||||| | || Sbjct 27067300 CGTGCCTATGACTTCATTTCCCATGAAATCCGTGCAGCGGAAGATCCTGAATTTTAGACT 27067359 Query 162412 TTCTACACCAAGAATATCCTCTTGAATGA 162440 ||||||||||| ||||| || || || || Sbjct 27067360 TTCTACACCAAAAATATTCTTTTAAACGA 27067388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551373677328600