Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirodela_20polyrhiza_20[genbank_20GCA_5F001981405.1_202017-01-17] 20 sequences; 136,670,443 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq9 113 1e-22 >seq9 Length=6991192 Score = 113 bits (124), Expect = 1e-22 Identities = 83/97 (86%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 226 GGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGG 285 || ||||| |||||| ||| |||||||||||| || ||||| ||||| ||||||||||| Sbjct 5876166 GGATGATCAGCCACACTGGGACTGAGACACGGCCCGGACTCCCACGGGGGGCAGCAGTGG 5876107 Query 286 GGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAA 322 ||||| ||| ||||||||| |||||| ||| |||||| Sbjct 5876106 GGAATCTTGGACAATGGGCGAAAGCCCGATCCAGCAA 5876070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497599700480