Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirodela_20polyrhiza_20[genbank_20GCA_5F001981405.1_202017-01-17] 20 sequences; 136,670,443 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq3 86.0 2e-14 seq18 82.4 3e-13 >seq3 Length=8976907 Score = 86.0 bits (94), Expect = 2e-14 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 389 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 444 || | || ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 2204519 TTGCRCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 2204464 >seq18 Length=4131207 Score = 82.4 bits (90), Expect = 3e-13 Identities = 71/86 (83%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 351 ATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCG 409 ||||||||| |||| | ||||||| | || |||||||||| ||||||| ||| | Sbjct 253060 ATTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTYG 253002 Query 410 GAACTTACCCGACAAGGAATTTCGCT 435 |||||||||||||||||||||||||| Sbjct 253001 GAACTTACCCGACAAGGAATTTCGCT 252976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702399659520