Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirodela_20polyrhiza_20[genbank_20GCA_5F001981405.1_202017-01-17]
20 sequences; 136,670,443 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq7 145 6e-30
>seq7
Length=7914316
Score = 145 bits (160), Expect = 6e-30
Identities = 383/579 (66%), Gaps = 10/579 (2%)
Strand=Plus/Minus
Query 61064 TGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCT 61123
||||||| ||| ||| | | || ||| |||||||| |||||||| || |||||||
Sbjct 1959496 TGTTCCCGATCAGGTACCCGCAGATCTGGGAGATGTACAAGAAGGCGGAGGCGTCCTTCT 1959437
Query 61124 GGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGT----TTATCG 61179
|||||| ||||||||| || | ||| | ||| | ||||||||| | | ||
Sbjct 1959436 GGACGGCGGAGGAGGTGGACCTCTCCCACGACCTCCGGCACTGGGAGCAGGACCTCACCG 1959377
Query 61180 AGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATC 61239
|| || | || ||||| | || || | || ||||| || || || ||||| |||
Sbjct 1959376 C-CGACGAGCGCCACTTCATCACCCACGTCCTCGCCTTCTTCGCGGCCTCCGACGGCATC 1959318
Query 61240 GTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGT 61299
|| ||||| | | || ||| | ||||||| || || | ||||| ||
Sbjct 1959317 GTGCTCGAGAACCTGGCSGGCCGCTTCATGAAGGAGGTCCAGGTCGCCGAGGCCCGCGCC 1959258
Query 61300 TTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATC 61359
||||||||||||||||| ||||| ||||| ||||||| ||||||||||| | ||| |
Sbjct 1959257 TTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACAGCCTCCTCCTG 1959198
Query 61360 GATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATA 61419
|| || ||||||| ||| | || | || | ||| ||| | || || |
Sbjct 1959197 GAGACCTACATCAAGGACTCCGAGGCCAAGGCCCGCCTCTTCCGCGCCGTGGACACCGTC 1959138
Query 61420 CCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACA 61479
|| ||| || || || || |||||| || ||||| | | | | || | |
Sbjct 1959137 CCCTGCGTGGCCCGCAAGGCCGACTGGGCCCTCCGCTGGAT--CGACTCCTCCGAGT-CC 1959081
Query 61480 TTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGG-ATCGTT 61538
|| | || || | | || || || |||||||| | || ||| || | | |
Sbjct 1959080 TTCGCCGAGCGCCTCGTCGCCTTCGCCTGCGTCGAGGGCATCTTCTTCTCCGGCAGCTTC 1959021
Query 61539 TGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGA 61598
|| ||| ||||| ||| | ||||| || || || |||||||| || |||||| ||| ||
Sbjct 1959020 TG-CGCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGA 1958962
Query 61599 GTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637
| | || || |||||||||||| | || || || || ||
Sbjct 1958961 GCTCATCTCCCGCGACGAGGGCCTCCACTGCGACTTCGC 1958923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567903092800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |