Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20aestivum_20[genbank_20GCA_5F002220415.2_202017-07-27] 279,439 sequences; 15,344,693,583 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq176822 78.8 9e-13 >seq176822 Length=21198 Score = 78.8 bits (86), Expect = 9e-13 Identities = 127/176 (72%), Gaps = 5/176 (3%) Strand=Plus/Plus Query 7 CGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGG 66 |||||||| ||||||| | | ||| ||| ||||| ||| |||| ||||| ||| ||| Sbjct 17085 CGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGAAATGCTTCGG 17144 Query 67 GGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGA- 125 ||| | | | ||| | || |||||| |||| || ||| || ||||| | || | || Sbjct 17145 GGAGTTGAAAATAAGCATAGATCCGGAGATTCCCAAATAGGTCAACCTGTTAAACTGCCT 17204 Query 126 GATATATC-ATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 | | ||| || | || |||| || | ||| ||| |||||||||||||| |||| Sbjct 17205 GCTGAATCCATGA-GC-AGGCAAGAGAC-AACCTGGCGAACTGAAACATCTTAGTA 17257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475509271259