Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20aestivum_20[genbank_20GCA_5F002220415.2_202017-07-27] 279,439 sequences; 15,344,693,583 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value SEQ93489 98.7 5e-19 seq247487 71.6 6e-11 seq130344 71.6 6e-11 SEQ57045 71.6 6e-11 >SEQ93489 Length=26120 Score = 98.7 bits (108), Expect = 5e-19 Identities = 84/102 (82%), Gaps = 4/102 (4%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| |||| | ||||| |||||||||||||||||||| Sbjct 4856 GGAAAAGAAACTAACAAGGATTCCCCTAGTAGCAGCGAGCGAACAGGGAAGAGCCCAGCG 4915 Query 61 CCGAAT-CCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGT 101 | |||| ||||| || || | | |||||| |||| |||| Sbjct 4916 CTGAATCCCCCGGGCCTCGCTCG---GCGGGAAATGTAGCGT 4954 Score = 98.7 bits (108), Expect = 5e-19 Identities = 84/102 (82%), Gaps = 4/102 (4%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| |||| | ||||| |||||||||||||||||||| Sbjct 17352 GGAAAAGAAACTAACAAGGATTCCCCTAGTAGCAGCGAGCGAACAGGGAAGAGCCCAGCG 17411 Query 61 CCGAAT-CCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGT 101 | |||| ||||| || || | | |||||| |||| |||| Sbjct 17412 CTGAATCCCCCGGGCCTCGCTCG---GCGGGAAATGTAGCGT 17450 >seq247487 Length=39449 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||| |||||||| || |||||||||| |||||||||||| |||| |||| |||||||| Sbjct 21308 GGAGAAGAAACTTACAAGGATTCCCTAAGTAACGGCGAGCGAACCGGGAGCAGCCCAGC 21366 >seq130344 Length=37271 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||| |||||||| || ||||||||| ||||||||||||||||| |||| |||||||| Sbjct 8533 GGAGAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGTGAACCGGGAGCAGCCCAGC 8591 >SEQ57045 Length=144062 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||| |||||||| || ||||||||| ||||||||||||||||| |||| |||||||| Sbjct 7414 GGAGAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGTGAACCGGGAGCAGCCCAGC 7356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 229796411760