Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20aestivum_20[genbank_20GCA_5F002220415.2_202017-07-27]
279,439 sequences; 15,344,693,583 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
SEQ93489 80.6 3e-13
seq6153 80.6 3e-13
seq224738 77.0 4e-12
seq264220 75.2 1e-11
SEQ28031 75.2 1e-11
SEQ63236 73.4 5e-11
>SEQ93489
Length=26120
Score = 80.6 bits (88), Expect = 3e-13
Identities = 102/133 (77%), Gaps = 8/133 (6%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || | ||||||||| |||||||||||| | |||| |||
Sbjct 2507 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACTAGCATTCAGGCA 2449
Query 70 -TA---AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC- 124
|| ||||||||| | ||||||||||| |||| |||||||| | || || || |
Sbjct 2448 ATATCCAGCCTGCTTGAAGCACTCTAATTTGTTCAAAGTAAAAGTGCCGG-CCCACCTCG 2390
Query 125 ACAC-CAATGAAG 136
|||| ||||||||
Sbjct 2389 ACACTCAATGAAG 2377
Score = 80.6 bits (88), Expect = 3e-13
Identities = 102/133 (77%), Gaps = 8/133 (6%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || | ||||||||| |||||||||||| | |||| |||
Sbjct 15005 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACTAGCATTCAGGCA 14947
Query 70 -TA---AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC- 124
|| ||||||||| | ||||||||||| |||| |||||||| | || || || |
Sbjct 14946 ATATCCAGCCTGCTTGAAGCACTCTAATTTGTTCAAAGTAAAAGTGCCGG-CCCACCTCG 14888
Query 125 ACAC-CAATGAAG 136
|||| ||||||||
Sbjct 14887 ACACTCAATGAAG 14875
>seq6153
Length=14520
Score = 80.6 bits (88), Expect = 3e-13
Identities = 144/204 (71%), Gaps = 6/204 (3%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||
Sbjct 9579 CCAACACAATAGGACCGGAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGTGCGAT 9521
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCAC-ACCA 130
||| |||||||| ||||||||||| |||| |||| | | | ||| | | | | |||
Sbjct 9520 AGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAATGCCGGTAACACGACCCGGCCA 9461
Query 131 ATGAAGGCATACGGGCTC--ACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCCGTGAG 188
|| ||||| || | || | | | | |||| | ||| | || |||||||||||
Sbjct 9460 ATTAAGGC-TAGGAGCGCGATGCCGGCCGAAGGGTCGAGTAGGTCGGTGCTCGCCGTGAG 9402
Query 189 GCGGACCATAGCACCCAGCCCGAG 212
||||||| ||||||||| ||
Sbjct 9401 GCGGACCGGCTGACCCAGCCCAAG 9378
>seq224738
Length=58824
Score = 77.0 bits (84), Expect = 4e-12
Identities = 78/99 (79%), Gaps = 2/99 (2%)
Strand=Plus/Minus
Query 9 GAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-G 67
||| |||||| |||||| || | |||||| | ||||||||||||||||||| | | |
Sbjct 19230 GAAGCCAACACAATAGGACCGGAA-TCCTATGATGTTATTCCATGCTAATGTATCCAGAG 19172
Query 68 CGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106
|| || |||||||| ||||||||||| |||| ||||
Sbjct 19171 CGATGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAA 19133
>seq264220
Length=3816
Score = 75.2 bits (82), Expect = 1e-11
Identities = 75/95 (79%), Gaps = 2/95 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGCGTA 71
|||||| |||||| || | |||||| || |||| |||||||||||||| | | |||
Sbjct 2048 CCAACACAATAGGACCGGAA-TCCTATGCTGTTATCCCATGCTAATGTATCCAGAGCGAT 2106
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106
|| |||||||| ||||||||||| |||| ||||
Sbjct 2107 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAA 2141
>SEQ28031
Length=3739
Score = 75.2 bits (82), Expect = 1e-11
Identities = 75/95 (79%), Gaps = 2/95 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | |||||
Sbjct 1207 CCAACACAATAGGACCGGAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGGGCGAT 1149
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106
|| |||||||| ||||||||||| |||| ||||
Sbjct 1148 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAA 1114
>SEQ63236
Length=27173
Score = 73.4 bits (80), Expect = 5e-11
Identities = 74/95 (78%), Gaps = 1/95 (1%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||
Sbjct 12298 CCAACACAATAGGACCGGAAATCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGAT 12239
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106
|| |||||||| ||||||||||| |||| ||||
Sbjct 12238 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAA 12204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593588754726
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |