Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20aestivum_20[genbank_20GCA_5F002220415.2_202017-07-27] 279,439 sequences; 15,344,693,583 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value SEQ93489 80.6 3e-13 seq6153 80.6 3e-13 seq224738 77.0 4e-12 seq264220 75.2 1e-11 SEQ28031 75.2 1e-11 SEQ63236 73.4 5e-11 >SEQ93489 Length=26120 Score = 80.6 bits (88), Expect = 3e-13 Identities = 102/133 (77%), Gaps = 8/133 (6%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| |||||||||||| | |||| ||| Sbjct 2507 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACTAGCATTCAGGCA 2449 Query 70 -TA---AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC- 124 || ||||||||| | ||||||||||| |||| |||||||| | || || || | Sbjct 2448 ATATCCAGCCTGCTTGAAGCACTCTAATTTGTTCAAAGTAAAAGTGCCGG-CCCACCTCG 2390 Query 125 ACAC-CAATGAAG 136 |||| |||||||| Sbjct 2389 ACACTCAATGAAG 2377 Score = 80.6 bits (88), Expect = 3e-13 Identities = 102/133 (77%), Gaps = 8/133 (6%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| |||||||||||| | |||| ||| Sbjct 15005 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACTAGCATTCAGGCA 14947 Query 70 -TA---AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC- 124 || ||||||||| | ||||||||||| |||| |||||||| | || || || | Sbjct 14946 ATATCCAGCCTGCTTGAAGCACTCTAATTTGTTCAAAGTAAAAGTGCCGG-CCCACCTCG 14888 Query 125 ACAC-CAATGAAG 136 |||| |||||||| Sbjct 14887 ACACTCAATGAAG 14875 >seq6153 Length=14520 Score = 80.6 bits (88), Expect = 3e-13 Identities = 144/204 (71%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||| Sbjct 9579 CCAACACAATAGGACCGGAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGTGCGAT 9521 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCAC-ACCA 130 ||| |||||||| ||||||||||| |||| |||| | | | ||| | | | | ||| Sbjct 9520 AGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAATGCCGGTAACACGACCCGGCCA 9461 Query 131 ATGAAGGCATACGGGCTC--ACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCCGTGAG 188 || ||||| || | || | | | | |||| | ||| | || ||||||||||| Sbjct 9460 ATTAAGGC-TAGGAGCGCGATGCCGGCCGAAGGGTCGAGTAGGTCGGTGCTCGCCGTGAG 9402 Query 189 GCGGACCATAGCACCCAGCCCGAG 212 ||||||| ||||||||| || Sbjct 9401 GCGGACCGGCTGACCCAGCCCAAG 9378 >seq224738 Length=58824 Score = 77.0 bits (84), Expect = 4e-12 Identities = 78/99 (79%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 9 GAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-G 67 ||| |||||| |||||| || | |||||| | ||||||||||||||||||| | | | Sbjct 19230 GAAGCCAACACAATAGGACCGGAA-TCCTATGATGTTATTCCATGCTAATGTATCCAGAG 19172 Query 68 CGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 || || |||||||| ||||||||||| |||| |||| Sbjct 19171 CGATGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAA 19133 >seq264220 Length=3816 Score = 75.2 bits (82), Expect = 1e-11 Identities = 75/95 (79%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGCGTA 71 |||||| |||||| || | |||||| || |||| |||||||||||||| | | ||| Sbjct 2048 CCAACACAATAGGACCGGAA-TCCTATGCTGTTATCCCATGCTAATGTATCCAGAGCGAT 2106 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 || |||||||| ||||||||||| |||| |||| Sbjct 2107 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAA 2141 >SEQ28031 Length=3739 Score = 75.2 bits (82), Expect = 1e-11 Identities = 75/95 (79%), Gaps = 2/95 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | ||||| Sbjct 1207 CCAACACAATAGGACCGGAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGGGCGAT 1149 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 || |||||||| ||||||||||| |||| |||| Sbjct 1148 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAA 1114 >SEQ63236 Length=27173 Score = 73.4 bits (80), Expect = 5e-11 Identities = 74/95 (78%), Gaps = 1/95 (1%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||| Sbjct 12298 CCAACACAATAGGACCGGAAATCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGAT 12239 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 || |||||||| ||||||||||| |||| |||| Sbjct 12238 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAA 12204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593588754726