Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20aestivum_20[genbank_20GCA_5F002220415.2_202017-07-27] 279,439 sequences; 15,344,693,583 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq253083 132 4e-26 >seq253083 Length=222612 Score = 132 bits (146), Expect = 4e-26 Identities = 543/845 (64%), Gaps = 27/845 (3%) Strand=Plus/Plus Query 61099 TACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATG 61158 ||||| ||||||| || ||||||||||| | |||||||| || | ||| ||| | Sbjct 123827 TACAAGAAGGCGGTGGCGTCCTTCTGGACCGCCGAGGAGGTGGACCTCTCCTCCGACGCG 123886 Query 61159 AATGACTGGGAGCGTT---TATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCG 61215 ||||||| | || | || || | || ||||| || ||| | || Sbjct 123887 CGCCACTGGGACACCACCCTCTCCAACGACGAGCGCCACTTCATCTCCCACGTGCTCGCC 123946 Query 61216 TTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAG 61275 ||||| ||||| || ||||| ||||| ||||| | | ||| | || Sbjct 123947 TTCTTCGCCGCCTCCGACGGCATCGTGCTGGAGAACCTCGCCTCCAGGTTCATGTCCGAC 124006 Query 61276 GTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCAC 61335 ||||| || | ||||| | ||||||||||||||||| ||||| ||||| ||||| Sbjct 124007 GTGCAGGTCGCCGAGGCCAGGGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCAC 124066 Query 61336 TCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA-GCGGGCGGAACGTGAACG 61394 || ||||||||| | |||||||| || |||||| | || | | || | | || || Sbjct 124067 TCCGAGATGTACTCCCTGCTCATCGAGACCTACATCCGCGACGACGTCGAGAAG-GACCG 124125 Query 61395 ATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAA 61454 | ||| |||||||| || || || || ||| || || || || |||||| || Sbjct 124126 CCTCTTCCGCGCCATCGACACCATCCCCGCCGTGCGCCGCAAGGCCGACTGGGCCCTCCG 124185 Query 61455 TTGGATCACCAGTACAACGGCTA--CATTTGGTGAACGATTGCTGGCATTTGCGGTGGTC 61512 |||||| || ||| | || | || || | | || || || ||| Sbjct 124186 CTGGATC-----GACGGCGGGGAGCGCTTCGCCGAGCGCATCGTCGCCTTCGCCTGCGTC 124240 Query 61513 GAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTT 61572 ||||| | || ||| || || || ||| ||||| ||| | ||||| || || || Sbjct 124241 GAGGGCATCTTCTTCTCCGGCTCCTTCTGCGCCATCTTCTGGCTCAAGAAGCGCGGGCTC 124300 Query 61573 ATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGAT 61632 ||||| || || |||||| ||| ||| | || || |||||||||||| |||| || || Sbjct 124301 ATGCCGGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGCCTGCACTGCGAC 124360 Query 61633 TTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTC-CGTCGGAGGAG---CGTGT 61688 || || | || || ||| ||| | | || | | ||| ||| || || Sbjct 124361 TTCGC---CTGCCTCCTC-TACGACATCCTGCG---CGGCAAGCTGGACGAGTCCCGCGT 124413 Query 61689 GGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATT--TCTGACTGACGCTTTG 61746 ||||| || ||||| || ||||| ||| || |||| ||||| || Sbjct 124414 CTTCGAGATCGTCTCCGAGGCCGTGGACATCGAGAGGGAGTTCGTCTG--CGACGCGCTG 124471 Query 61747 CCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCC 61806 ||| | | ||| |||||||||| | | || ||| ||||| || || || || ||| Sbjct 124472 CCCTGCGCGCTCGTCGGCATGAACGGCGACCTCATGAGCCAGTACATCGAGTTCGTGGCC 124531 Query 61807 GACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGAT 61866 ||||| ||| | | | |||| ||| | | || || | | ||||| || || Sbjct 124532 GACCGCCTGCTCATGGCGCTGGGCTGCAAGAAGCTGTACAACGCCACCAACCCGTTCGAC 124591 Query 61867 TTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGAC 61926 | ||||| | || |||||| | |||||||| || || |||||||| || || ||||| Sbjct 124592 TGGATGGAGCTCATCTCGCTGCAGGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGAG 124651 Query 61927 TATCA 61931 || || Sbjct 124652 TACCA 124656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396214017446960