Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq97765 75.2 1e-11 seq52287 75.2 1e-11 seq2 75.2 1e-11 >seq97765 Length=56405 Score = 75.2 bits (82), Expect = 1e-11 Identities = 75/95 (79%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | ||||||| | |||| |||||||||||||| | | ||| Sbjct 39258 CCAACACAATAGGACCGGA-GTCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGAT 39316 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 || |||||||| ||||||||||| |||| |||| Sbjct 39317 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAA 39351 >seq52287 Length=38902 Score = 75.2 bits (82), Expect = 1e-11 Identities = 75/95 (79%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||||||||||| || | |||||| | |||| |||||||||||||| | | ||| Sbjct 13268 CCAACAAAATAGGACCGGAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGAT 13326 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 || |||||||| ||||||||||| |||| |||| Sbjct 13327 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAA 13361 >seq2 Length=690537804 Score = 75.2 bits (82), Expect = 1e-11 Identities = 75/95 (79%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||| Sbjct 79079573 CCAACACAATAGGACCGGAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGTGCGAT 79079631 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 ||| |||||||| ||||||||||| |||| |||| Sbjct 79079632 AGCTTGCTTTGAGCACTCTAATTTCTTCAATGTAA 79079666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594340093356