Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq14 134 1e-26
>seq14
Length=755408349
Score = 134 bits (148), Expect = 1e-26
Identities = 543/844 (64%), Gaps = 25/844 (3%)
Strand=Plus/Minus
Query 61099 TACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATG 61158
||||| ||||||| || ||||||||||| | |||||||| || | ||| ||| |
Sbjct 132513095 TACAAGAAGGCGGTGGCCTCCTTCTGGACCGCCGAGGAGGTGGACCTCTCCTCCGACGCG 132513036
Query 61159 AATGACTGGGAG----CGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGC 61214
||||||| || | || | || || | || ||||| || ||| | ||
Sbjct 132513035 CGCCACTGGGACACCACGCTC-TCCAACGACGAGCGCCACTTCATCTCCCACGTGCTCGC 132512977
Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGA 61274
||||| ||||| |||||||| ||||| ||||| | | ||| | ||
Sbjct 132512976 CTTCTTCGCCGCCTCGGACGGCATCGTGCTCGAGAACCTCGCCTCCAGGTTCATGTCCGA 132512917
Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCA 61334
||||| || | ||||| | ||||||||||||||||| ||||| ||||| ||||
Sbjct 132512916 CGTGCAGGTCGCCGAGGCCAGGGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCA 132512857
Query 61335 CTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA-GCGGGCGGAACGTGAAC 61393
||| ||||||||| | |||||||| || |||||| | || | | || | | || |
Sbjct 132512856 CTCCGAGATGTACTCCCTGCTCATCGAGACCTACATCCGCGACGACGTCGAGAAG-GACC 132512798
Query 61394 GATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCA 61453
| | ||| |||||||| || ||||| || ||| || || || || |||||| |
Sbjct 132512797 GCCTCTTCCGCGCCATCGACACCATACCCGCCGTGCGCCGCAAGGCCGACTGGGCCCTGC 132512738
Query 61454 ATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCG 61513
|||||| | || || || | || || | | || || || || |
Sbjct 132512737 GCTGGATCGACGGT---GGGGAGCGCTTCGCCGAGCGCATCGTCGCCTTCGCCTGCGTGG 132512681
Query 61514 AGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTA 61573
|||| | || ||| || || || ||| ||||| ||| | ||||| || || || |
Sbjct 132512680 AGGGCATCTTCTTCTCGGGCTCCTTCTGCGCCATCTTCTGGCTCAAGAAGCGCGGGCTCA 132512621
Query 61574 TGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATT 61633
|||| || || |||||| ||| ||| | || || |||||||||||| |||| || || |
Sbjct 132512620 TGCCGGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGCCTGCACTGCGACT 132512561
Query 61634 TTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTC-CGTCGGAGGAG---CGTGTG 61689
| || | || || ||| ||| | | || | | ||| ||| || ||
Sbjct 132512560 TCGC---CTGCCTCCTC-TACGACATCCTGCG---CGGCAAGCTGGACGAGTCACGCGTC 132512508
Query 61690 GGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATT--TCTGACTGACGCTTTGC 61747
||||| || ||||| || ||||| ||| || |||| ||||| |||
Sbjct 132512507 TTCGAGATCGTCTCCGAGGCCGTGGACATCGAGAGGGAGTTCGTCTG--CGACGCGCTGC 132512450
Query 61748 CCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCG 61807
|| | | ||| |||||||||| | | || ||| ||||| || || || || ||||
Sbjct 132512449 CCTGCGCGCTCGTCGGCATGAACGGCGACCTGATGAGCCAGTACATCGAGTTCGTCGCCG 132512390
Query 61808 ACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATT 61867
|||| ||| | | | |||| ||| | | || || | | ||||| || || |
Sbjct 132512389 ACCGCCTGCTCATGGCGCTGGGCTGCAAGAAGCTATACAACGCCACCAACCCGTTCGACT 132512330
Query 61868 TCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACT 61927
||||| | || || ||| | |||||||| || || |||||||| || || ||||| |
Sbjct 132512329 GGATGGAGCTCATCTCCCTGCAGGGCAAGACCAACTTCTTCGAGAAGCGCGTGGGCGAGT 132512270
Query 61928 ATCA 61931
| ||
Sbjct 132512269 ACCA 132512266
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396845392081760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |