Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_031918.1
Length=45342
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 150 5e-32
>seq129631
Length=630463
Score = 150 bits (166), Expect = 5e-32
Identities = 243/344 (71%), Gaps = 13/344 (4%)
Strand=Plus/Minus
Query 33588 CATTTGCATCACACCACCCATTTGCTGGATAAC---AATTTCTGTGGTGTATTTTTCAAC 33644
|||||||||| ||| || || | |||| ||||||||| || || |||||
Sbjct 140987 CATTTGCATCGTACCGCCAATGT------TAACTATAATTTCTGTTGTATAACGTTCAAG 140934
Query 33645 TCCAGCATTATCAGTCCATTTTCTAGTGCGCAACTGA-CCTTCAAAATAAACTTGTGAGC 33703
||| | || |||||||||||| | || || ||||||| ||| ||||| || |
Sbjct 140933 ACCATTTTGGTCTTGCCATTTTCTAGTTTG-AAGGGATCCTTCAATATATACTTGAGAAC 140875
Query 33704 CTTTCCTAAGATACTCACCAGCAATTTCAGCGAGCTTGCCAAAGATAACTACGCGGTGCC 33763
|||| || | ||| || |||||||||||||| | || ||||| | |||| | ||||
Sbjct 140874 CTTTTCTCAAATATTCTCCAGCAATTTCAGCCAATTTTCCAAATAATACTATTCTATGCC 140815
Query 33764 ATTCAGTTTGCTCCTTTTTCTCACCAGTAGCCTTATCATTCCATGATTCCGATGTAGCAA 33823
|||| |||| ||| || || ||||||||| ||||| ||||| || || || ||||
Sbjct 140814 ATTCTGTTTTCTCTTTATTTTCACCAGTATTTTTATCTTTCCAGTTCTCTGAAGTTGCAA 140755
Query 33824 CAGATACGTTGGCAACAGCGCCGCCATTTGGCATGTATCGCACTTCTGGGTCCTGGCCTA 33883
| | || | || || ||||||||||| || || ||||| || || |||||||
Sbjct 140754 GTGTCATATTTACTACTGCATTACCATTTGGCATATAACGAACTTCAGGATCTTGGCCTA 140695
Query 33884 ATGTG-CCGAGGATGATTACTTTATTTACGCCGCGAGTTGCCAT 33926
| ||| || | | ||||||||||||||| || | | |||||||
Sbjct 140694 A-GTGACCAATTAAGATTACTTTATTTACACCTCTACTTGCCAT 140652
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 144716058064032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |