Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_031918.1 Length=45342 Score E Sequences producing significant alignments: (Bits) Value seq129631 150 5e-32 >seq129631 Length=630463 Score = 150 bits (166), Expect = 5e-32 Identities = 243/344 (71%), Gaps = 13/344 (4%) Strand=Plus/Minus Query 33588 CATTTGCATCACACCACCCATTTGCTGGATAAC---AATTTCTGTGGTGTATTTTTCAAC 33644 |||||||||| ||| || || | |||| ||||||||| || || ||||| Sbjct 140987 CATTTGCATCGTACCGCCAATGT------TAACTATAATTTCTGTTGTATAACGTTCAAG 140934 Query 33645 TCCAGCATTATCAGTCCATTTTCTAGTGCGCAACTGA-CCTTCAAAATAAACTTGTGAGC 33703 ||| | || |||||||||||| | || || ||||||| ||| ||||| || | Sbjct 140933 ACCATTTTGGTCTTGCCATTTTCTAGTTTG-AAGGGATCCTTCAATATATACTTGAGAAC 140875 Query 33704 CTTTCCTAAGATACTCACCAGCAATTTCAGCGAGCTTGCCAAAGATAACTACGCGGTGCC 33763 |||| || | ||| || |||||||||||||| | || ||||| | |||| | |||| Sbjct 140874 CTTTTCTCAAATATTCTCCAGCAATTTCAGCCAATTTTCCAAATAATACTATTCTATGCC 140815 Query 33764 ATTCAGTTTGCTCCTTTTTCTCACCAGTAGCCTTATCATTCCATGATTCCGATGTAGCAA 33823 |||| |||| ||| || || ||||||||| ||||| ||||| || || || |||| Sbjct 140814 ATTCTGTTTTCTCTTTATTTTCACCAGTATTTTTATCTTTCCAGTTCTCTGAAGTTGCAA 140755 Query 33824 CAGATACGTTGGCAACAGCGCCGCCATTTGGCATGTATCGCACTTCTGGGTCCTGGCCTA 33883 | | || | || || ||||||||||| || || ||||| || || ||||||| Sbjct 140754 GTGTCATATTTACTACTGCATTACCATTTGGCATATAACGAACTTCAGGATCTTGGCCTA 140695 Query 33884 ATGTG-CCGAGGATGATTACTTTATTTACGCCGCGAGTTGCCAT 33926 | ||| || | | ||||||||||||||| || | | ||||||| Sbjct 140694 A-GTGACCAATTAAGATTACTTTATTTACACCTCTACTTGCCAT 140652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144716058064032