Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq129631 104 3e-17 >seq129631 Length=630463 Score = 104 bits (114), Expect = 3e-17 Identities = 230/339 (68%), Gaps = 12/339 (4%) Strand=Plus/Plus Query 153081 TATGATTCATATAAGTATCCTATTTTTGAGAAGCTAACACAGCAACAACTAGGATTCTTT 153140 |||||| | | || ||| ||||||||| || |||| | ||||||| ||| ||| Sbjct 524263 TATGATCAACAAAAATATAATATTTTTGAAAAACTAATTGAAAAACAACTTTCATTTTTT 524322 Query 153141 TGGAAACCCGAAGA----GGTTTCTCTCCAAAAAGATCGTTCTGATTACCAGAAGCTTCG 153196 |||| ||| ||||| | ||| ||| |||||| | |||| || || | | Sbjct 524323 TGGAGACCAGAAGAAATAGATTTATCT----AAAGATAGAATAGATTTTCAAAATTTACC 524378 Query 153197 TCCAGAACAGAAGCATATCTTTACATCTAATCTAAAATATCAAATCCTCCTTGATTCTGT 153256 | | | | || ||||| |||| | |||| |||||||||||| | ||||||||| | Sbjct 524379 TTCTAACGAAAAACATATTTTTATAAGTAATTTAAAATATCAAACTTTACTTGATTCTAT 524438 Query 153257 TCAGGGTCGTGGTCCTAGTATGGCTTTTGCTCC-ATATTGTTCCCTACCTGAACTAGAAG 153315 ||| || | |||||| || |||||| || ||| | ||| | || ||| ||||| Sbjct 524439 TCAAGGAAGAAGTCCTAACATCGCTTTTTTACCTATAGT-TTCTATTCCCGAATTAGAAA 524497 Query 153316 GTTGTATGAAAGCGTGGGAGTTTATGGAGATGATCCATTCACGTTCCTACACATATATTA 153375 || || || | ||| ||| |||| || ||||||||||| || ||| |||| | Sbjct 524498 CATGGATTGAAACATGGTCTTTTTCAGAGACAATTCATTCACGTTCATATACACATATAA 524557 Query 153376 TTAAGAACATCTATTCA-GATCCTTCTGAAGTATTTGAT 153413 ||| || || |||| | |||| |||| ||||||||| Sbjct 524558 TTAGAAATAT-TATTAATCATCCATCTGTCGTATTTGAT 524595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690170199045840