Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_031927.1
Length=216121
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 104 3e-17
>seq129631
Length=630463
Score = 104 bits (114), Expect = 3e-17
Identities = 230/339 (68%), Gaps = 12/339 (4%)
Strand=Plus/Plus
Query 153081 TATGATTCATATAAGTATCCTATTTTTGAGAAGCTAACACAGCAACAACTAGGATTCTTT 153140
|||||| | | || ||| ||||||||| || |||| | ||||||| ||| |||
Sbjct 524263 TATGATCAACAAAAATATAATATTTTTGAAAAACTAATTGAAAAACAACTTTCATTTTTT 524322
Query 153141 TGGAAACCCGAAGA----GGTTTCTCTCCAAAAAGATCGTTCTGATTACCAGAAGCTTCG 153196
|||| ||| ||||| | ||| ||| |||||| | |||| || || | |
Sbjct 524323 TGGAGACCAGAAGAAATAGATTTATCT----AAAGATAGAATAGATTTTCAAAATTTACC 524378
Query 153197 TCCAGAACAGAAGCATATCTTTACATCTAATCTAAAATATCAAATCCTCCTTGATTCTGT 153256
| | | | || ||||| |||| | |||| |||||||||||| | ||||||||| |
Sbjct 524379 TTCTAACGAAAAACATATTTTTATAAGTAATTTAAAATATCAAACTTTACTTGATTCTAT 524438
Query 153257 TCAGGGTCGTGGTCCTAGTATGGCTTTTGCTCC-ATATTGTTCCCTACCTGAACTAGAAG 153315
||| || | |||||| || |||||| || ||| | ||| | || ||| |||||
Sbjct 524439 TCAAGGAAGAAGTCCTAACATCGCTTTTTTACCTATAGT-TTCTATTCCCGAATTAGAAA 524497
Query 153316 GTTGTATGAAAGCGTGGGAGTTTATGGAGATGATCCATTCACGTTCCTACACATATATTA 153375
|| || || | ||| ||| |||| || ||||||||||| || ||| |||| |
Sbjct 524498 CATGGATTGAAACATGGTCTTTTTCAGAGACAATTCATTCACGTTCATATACACATATAA 524557
Query 153376 TTAAGAACATCTATTCA-GATCCTTCTGAAGTATTTGAT 153413
||| || || |||| | |||| |||| |||||||||
Sbjct 524558 TTAGAAATAT-TATTAATCATCCATCTGTCGTATTTGAT 524595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 690170199045840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |