Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= AAMG01000026.1 Length=199 Score E Sequences producing significant alignments: (Bits) Value seq54714 125 8e-27 seq112931 120 3e-25 >seq54714 Length=4730 Score = 125 bits (138), Expect = 8e-27 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| |||||| ||||||||||||||||| |||||||||||| |||||| ||| | ||| Sbjct 1130 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCTGGGCAACCGGAC 1189 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 ||||||| | ||||| | | |||| || | || |||| ||| || ||||| || Sbjct 1190 CTCGTTAGTTCAACTTAGCGTATATTTAGGGACCTTAGCTGATGGTCTGGGTTCTTTCCC 1249 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGCGCATTC 180 |||||| | |||||||| |||||| ||||||| || |||| | | | |||||| Sbjct 1250 TCTCGGCCTTGGACCTTAGCACCCAAAGCCTCACT-GC-CGGCCATATTTAATAGCATTC 1307 Query 181 GGAGTTTGGCAGGACTTG 198 |||||| | | ||| ||| Sbjct 1308 GGAGTTCGTCTGGATTTG 1325 >seq112931 Length=376 Score = 120 bits (132), Expect = 3e-25 Identities = 146/198 (74%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| |||||| ||||||||||||||||| |||||||||||| ||||| || | || Sbjct 17 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCAATGCAGTTCAAC 76 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 |||| | ||||| | | |||| || | || ||| ||| || ||||| || Sbjct 77 CGCGTTGCTTCAACTTAGCATATATTTGGGGACCTTAGCTGTTGGTCTGGGTTCTTTCCC 136 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGCGCATTC 180 |||||| || |||||||| |||||||||||||||| || | | | | || |||||| Sbjct 137 TCTCGGACATGGACCTTAGCACCCATGCCCTCACTGCCGTAG-AACATTTATTAGCATTC 195 Query 181 GGAGTTTGGCAGGACTTG 198 |||||||| ||||| ||| Sbjct 196 GGAGTTTGTCAGGAATTG 213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535000057032