Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= AAMG01000056.1 Length=332 Score E Sequences producing significant alignments: (Bits) Value seq54714 149 1e-33 seq458846 78.8 2e-12 seq154911 73.4 8e-11 >seq54714 Length=4730 Score = 149 bits (164), Expect = 1e-33 Identities = 146/186 (78%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 146 CTATTCCGTCAGCCGGCGGCGTTGTCACTCCTGCGTCCCCACGTCACCCTCAAATGTAGT 205 |||||||||||| ||||| ||||||| || |||| |||| || | | | | ||| Sbjct 762 CTATTCCGTCAGTTCGCGGCAGTGTCACTACTCCGTCACCACATCGCAGTTATAAAAAGT 821 Query 206 AACGGAATACTAACCGTTTCTGCCATCGG-TCTCGCCGTTCGGCTGAACCTTATGACCCG 264 | |||||| ||||| || | ||||||| | | || ||||| || ||||| | |||| Sbjct 822 ACGGGAATATTAACCCGTTGT-CCATCGGCTTGCTCCTTTCGGATGCGCCTTAGGCCCCG 880 Query 265 ACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGTTTC 324 ||| |||||||||||||||||| ||||||||||||||| ||||||||| | | ||||||| Sbjct 881 ACTAACCCTGATCCGATTAGCGTTGATCAGGAAACCTTGGTCTTTCGGTGGGCGGGTTTC 940 Query 325 CCACCC 330 |||||| Sbjct 941 CCACCC 946 >seq458846 Length=322 Score = 78.8 bits (86), Expect = 2e-12 Identities = 64/78 (82%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 255 TTATGACCCGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCG 314 ||| | ||||||| ||||| | | ||||||| | | |||||||||||||||||||| | Sbjct 37 TTAGGTCCCGACTAACCCTCAGCTGATTAGCATGGCTGAGGAAACCTTAGTCTTTCGGTG 96 Query 315 AGGGGGTTTCCCACCCCC 332 |||||||||| | ||||| Sbjct 97 AGGGGGTTTCTCGCCCCC 114 >seq154911 Length=3834 Score = 73.4 bits (80), Expect = 8e-11 Identities = 111/157 (71%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 173 CTCCTGCGTCCCCACGTCACCCTCAAATGTAGTAACGGAATACTAACCGTTTCTGCCATC 232 || || ||||||| | || | | |||| || | |||||| ||||| || | ||||| Sbjct 1632 CTTCTTCGTCCCCCCTTCGCAGTAAAATTAAGCACAGGAATATTAACCTGTTTT-CCATC 1574 Query 233 GGTCTCGCCGTTCGGCTGAACCTTATGACCCGACTTACCCTGATCCGATTAGCGGTGATC 292 | ||| | | || ||||| | || ||||||||| ||||||| || || | Sbjct 1573 GACTACGCTTTGCAGCCTCGCCTTAGGGGTCGGCTTACCCTGCCCCGATTAACGTTGGAC 1514 Query 293 AGGAAACCTTAGTCTTTCGGCGAGGGGGTTTCCCACC 329 ||||||||||||| |||||||||| ||||| |||| Sbjct 1513 AGGAAACCTTAGTTTTTCGGCGAGCAGGTTTTTCACC 1477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 955207478400