Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq129507 161 7e-38 seq159372 114 9e-24 seq200237 87.8 1e-15 seq213927 84.2 2e-14 >seq129507 Length=2248 Score = 161 bits (178), Expect = 7e-38 Identities = 110/124 (89%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| ||||||||||||||||||||||||| ||||||| || || Sbjct 1836 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACTCCGTGGTAACCGTCC 1777 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 ||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 1776 CCCCGAAGGTTAGACTAGCTACTTCTGGAGCAACCCACTCCCATGGTGTGACGGGCGGTG 1717 Query 135 TGTA 138 |||| Sbjct 1716 TGTA 1713 >seq159372 Length=6624 Score = 114 bits (126), Expect = 9e-24 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 18 TACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCC 77 ||||| ||||||||| |||||||||||||||||| |||| |||| ||||||||||| Sbjct 2294 TACGGCTACCTTGTTACGACTTCACCCCAGTCATCGGCCACACCGTGGCAAGCGCCCTCC 2235 Query 78 CGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGT 137 ||| || || |||| || || || || | ||||||||| ||||||||||||||||| Sbjct 2234 CGACGGCTAGGCTAGCTGCTCCTGGGGCTAAGAACTCCCATGCTGTGACGGGCGGTGTGT 2175 Query 138 A 138 | Sbjct 2174 A 2174 >seq200237 Length=4127 Score = 87.8 bits (96), Expect = 1e-15 Identities = 96/125 (77%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| |||||||||||||||| | | | ||||| ||| || Sbjct 3139 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTTAGCTGCC 3198 Query 75 TCCCGAAGGTTAAGCTACCTAC-TTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGT 133 ||| ||||| || |||| ||| | |||| ||||||||||||||||||||||| Sbjct 3199 TCCTTGCGGTTA-GCGCACTACCTTCGGGTAAAACCAACTCCCATGGTGTGACGGGCGGT 3257 Query 134 GTGTA 138 ||||| Sbjct 3258 GTGTA 3262 >seq213927 Length=631 Score = 84.2 bits (92), Expect = 2e-14 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 18 TACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCC 77 ||||| ||||||||| |||||||||||||||||| |||| |||| ||||||||||| Sbjct 69 TACGGCTACCTTGTTACGACTTCACCCCAGTCATCGGCCACACCGTGGCAAGCGCCCTCC 10 Query 78 CGAAGGTTA 86 ||||||||| Sbjct 9 CGAAGGTTA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 343982523960