Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq310842 178 1e-42 seq76412 170 2e-40 seq54714 168 6e-40 seq374682 147 2e-33 seq159372 96.9 3e-18 seq460307 95.1 1e-17 seq200237 95.1 1e-17 seq255358 86.0 6e-15 seq154911 80.6 3e-13 >seq310842 Length=204 Score = 178 bits (196), Expect = 1e-42 Identities = 152/182 (84%), Gaps = 12/182 (7%) Strand=Plus/Plus Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 |||| |||| |||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 2 GGCACACGGGGGATGCCTAGGCTCTCAGAGGCGAAGAAGGACGTGATAAGCTGCGATAAG 61 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGA-TAT 119 ||||||| ||||||| || |||| |||||||||||| |||||||||||||||| || ||| Sbjct 62 CTACGGGTATTGGCAAATGCGAACTGATCCGTAGATTTCCGAATGGGGCAACCTGACTAT 121 Query 120 ATTGGAGATATA-TCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAAG 178 ||| ||| ||| || || || | ||||||| | ||||||||||||||||| Sbjct 122 -TTGAAGA-ATAGTCGTA----TA----AAACGCGAACGCGCTGAACTGAAACATCTAAG 171 Query 179 TA 180 || Sbjct 172 TA 173 >seq76412 Length=781 Score = 170 bits (188), Expect = 2e-40 Identities = 143/173 (83%), Gaps = 3/173 (2%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 || ||||||||||||| || |||||||||||||||||| |||||||||||||||| ||| Sbjct 560 GGCGGATGCCTAGGCTTTCAGAGGCGAAGAAGGACGTGGTAAGCTGCGAAAAGCTCGGGG 501 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGAGA 127 |||||||||| |||||||||||| |||| |||||||||||||||||| || ||| ||| Sbjct 500 GATTGGCACACACGAATTGATCCCGAGATGTCCGAATGGGGCAACCCGGCATGTTGAAGA 441 Query 128 TATATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 || ||| || || | | || ||| || ||||||||||||||||||| Sbjct 440 CATGTCACCTCG-TAAGAG--GAGCAAACCAGGAGAACTGAAACATCTAAGTA 391 >seq54714 Length=4730 Score = 168 bits (186), Expect = 6e-40 Identities = 149/182 (82%), Gaps = 12/182 (7%) Strand=Plus/Minus Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 |||| |||| |||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 2229 GGCACACGGGGGATGCCTAGGCTCTCAGAGGCGAAGAAGGACGTGATAAGCTGCGATAAG 2170 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGA-TAT 119 || ||||||||||| || ||| ||||||| |||| |||||||||||||||| || ||| Sbjct 2169 CTTTGGGGATTGGCAAATGCGACTTGATCCAGAGATTTCCGAATGGGGCAACCTGACTAT 2110 Query 120 ATTGGAGATATA-TCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAAG 178 ||| ||| ||| || || | || ||||||| | ||||||||||||||||| Sbjct 2109 -TTGAAGA-ATAGTCGTA--------TGATACGCGAACGCGCTGAACTGAAACATCTAAG 2060 Query 179 TA 180 || Sbjct 2059 TA 2058 >seq374682 Length=227 Score = 147 bits (162), Expect = 2e-33 Identities = 108/126 (86%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 |||| |||| ||||| |||||||||| ||||||| ||||||||||||||||||||| ||| Sbjct 128 GGCACACGGGGGATGTCTAGGCTCTCAGAGGCGATGAAGGACGTGATAAGCTGCGATAAG 69 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATA 120 | |||||||| |||| || ||| ||||||||| ||| |||||||||||||||| | ||| Sbjct 68 CCACGGGGATCGGCAAATGCGATTTGATCCGTGGATTTCCGAATGGGGCAACCTAACATA 9 Query 121 TTGGAG 126 || || Sbjct 8 CTGAAG 3 >seq159372 Length=6624 Score = 96.9 bits (106), Expect = 3e-18 Identities = 140/193 (73%), Gaps = 21/193 (11%) Strand=Plus/Plus Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGC 61 ||| ||||||||||||| ||| || ||||||| |||||||||| || |||||||||| Sbjct 2822 GCACACGGTGGATGCCTTGGCGGTCAGAGGCGATGAAGGACGTGGTAGCCTGCGAAAAGT 2881 Query 62 TACGGGGA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC------ 114 |||||| ||||| | | | |||||||| || ||||||||||| ||||| Sbjct 2882 GTCGGGGAGCTGGCA-ACAAGCTTTGATCCGGCAATGTCCGAATGGGGGAACCCACCTCG 2940 Query 115 ---GATATAT----TGGAGATATATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTG 167 || ||| ||| || ||| |||| | || | ||||||||| || |||||| Sbjct 2941 CAAGAGGTATCGTATGGTGA-ATA-CATAGCCATACG----AGGCGAACGCGGTGAACTG 2994 Query 168 AAACATCTAAGTA 180 ||| ||||||||| Sbjct 2995 AAATATCTAAGTA 3007 >seq460307 Length=327 Score = 95.1 bits (104), Expect = 1e-17 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 |||| |||| |||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 266 GGCACACGGGGGATGCCTAGGCTCTCAGAGGCGAAGAAGGACGTGATAAGCTGCGATAAG 325 Query 61 CT 62 || Sbjct 326 CT 327 >seq200237 Length=4127 Score = 95.1 bits (104), Expect = 1e-17 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| | |||||| ||||||||||||| ||||||| |||| |||| Sbjct 2279 GGTGGATGCCTTGGCATGCACAGGCGATGAAGGACGTGATACGCTGCGATAAGCGTCGGG 2220 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 || || |||| |||||||| ||| ||||||||||||||||| Sbjct 2219 GAGGTGCGAATACCCTTTGATCCGACGATTTCCGAATGGGGCAACCC 2173 >seq255358 Length=1981 Score = 86.0 bits (94), Expect = 6e-15 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| | ||||||| ||||||||||||| |||||| |||| | ||| Sbjct 1935 GGTGGATGCCTTGGCAGTAAGAGGCGATGAAGGACGTGATACTCTGCGATAAGCCATGGG 1876 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 || | ||| | ||||||| | ||| ||||||||||| ||||| Sbjct 1875 GAGCTGAGAATAAGCTTTGATCCATGGATTTCCGAATGGGGAAACCC 1829 >seq154911 Length=3834 Score = 80.6 bits (88), Expect = 3e-13 Identities = 86/113 (76%), Gaps = 7/113 (6%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 |||| |||||| ||| || ||||||| |||||||||| ||| ||||||||||| |||| Sbjct 200 GGTGAATGCCTTGGCAGTCAGAGGCGACGAAGGACGTGCTAATCTGCGAAAAGCGACGGC 259 Query 68 GATTGGCACATACGAA----TTGATCCGTAGATATCCGAATGGGGCAACCCGA 116 | || ||| ||| | | |||| ||| ||||||||||| ||||||| Sbjct 260 AA---GCTGATATGAAGCGCTACAACCGTCGATCTCCGAATGGGGAAACCCGA 309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474494098201