Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq319988 143 4e-32 seq289402 114 2e-23 seq150608 113 7e-23 >seq319988 Length=207 Score = 143 bits (158), Expect = 4e-32 Identities = 106/124 (85%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 57 GCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCG 116 |||||||||||| |||||||||| |||||||||||| || || |||| |||||||||||| Sbjct 84 GCCCGGTGCCGGTGCTTCTTCCACTACCTTCTGGTGGCGGCGCTGCATCGAGCAATCGCG 143 Query 117 GTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACG 176 || |||||||||||||||| ||| |||||||||| ||| || || | |||||||| || Sbjct 144 CTCACCCAGGTGGATGGCGTTGCCTTGGCCGTCGGCCAGCACCTGGATCTCCACGTGGCG 203 Query 177 TGGG 180 ||| Sbjct 204 CGGG 207 >seq289402 Length=17664 Score = 114 bits (126), Expect = 2e-23 Identities = 117/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 57 GCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCG 116 ||| ||||| ||||| ||||||| || ||||||||||| || |||| ||||| || || Sbjct 6794 GCCTGGTGCTGGCGCCTCTTCCACGACTTTCTGGTGACGGCGCTGCATGGAGCAGTCACG 6735 Query 117 GTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACG 176 || |||| | ||| |||| |||||| || || | || ||| || | ||| ||||| || Sbjct 6734 TTCTGCCAGATAGATCGCGTTGCCCTGACCATCTGCCAATACCTGAATTTCGACGTGGCG 6675 Query 177 TGGGTTGGTCAGGTACTTTTCCAGGTAGACCAT 209 ||||| ||||||||| |||| ||| ||||| Sbjct 6674 AGGGTTTTCCAGGTACTTCTCCATGTACACCAT 6642 >seq150608 Length=1458 Score = 113 bits (124), Expect = 7e-23 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 67 GGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCGCCCAGG 126 ||||||||||| | || |||||||||||||| |||| ||||| || || |||||||| Sbjct 942 GGCGCTTCTTCAACCACTTTCTGGTGACGACGCTGCATAGAGCAGTCACGTTCGCCCAGA 1001 Query 127 TGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGGGTTGGTC 186 | ||| |||| |||||||||||| | ||| || || | || | ||| || || || | Sbjct 1002 TAGATCGCGTTGCCCTGGCCGTCAGCCAGAACCTGAATCTCGATGTGGCGCGGATTCTCC 1061 Query 187 AGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAA 221 || ||||| |||| ||| ||||| ||||| ||| Sbjct 1062 AGATACTTCTCCATGTAAACCATGTCGTTGCTGAA 1096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 732440554270