Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq198834 113 3e-23 seq241776 104 1e-20 seq240657 104 1e-20 seq13302 100 2e-19 seq91150 91.5 9e-17 seq120291 87.8 1e-15 seq205015 80.6 2e-13 seq82360 77.0 2e-12 seq251811 75.2 7e-12 seq199870 75.2 7e-12 seq187076 75.2 7e-12 seq58340 75.2 7e-12 seq126513 71.6 8e-11 >seq198834 Length=8127 Score = 113 bits (124), Expect = 3e-23 Identities = 96/112 (86%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| ||| |||||| | || | ||||||||||||||| || |||||| Sbjct 5738 CCGTT-GCCGGCTCCCCAACGCCAATCCGGAGA--TCTCACTAAGCCATT-CAATCGGTA 5793 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||| ||||| |||||||||||||||||||||||| |||||| |||| Sbjct 5794 GTA-GCGACAGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 5843 >seq241776 Length=8464 Score = 104 bits (114), Expect = 1e-20 Identities = 74/81 (91%), Gaps = 3/81 (4%) Strand=Plus/Minus Query 44 AAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAG 103 |||| |||||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct 541 AAGTCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAG 484 Query 104 GGACGTAATACAACGCAAGCT 124 ||||||| | ||||||||||| Sbjct 483 GGACGTAGT-CAACGCAAGCT 464 >seq240657 Length=9895 Score = 104 bits (114), Expect = 1e-20 Identities = 94/112 (84%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||| | ||| || ||||| || |||| |||| |||||| || || |||||| Sbjct 2027 CCGTT-GCCAGCTCCCGAATACCAATCCC--AAGTCCTCATTAAGCCGTT-CAATCGGTA 2082 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct 2083 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCAAGCT 2132 >seq13302 Length=8527 Score = 100 bits (110), Expect = 2e-19 Identities = 77/86 (90%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| || |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 8220 TCCGAA-GTCCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 8276 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||||||||||| Sbjct 8277 GGCAGGGACGTAAT-CAACGCAAGCT 8301 >seq91150 Length=480 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||| ||||||| || ||||||||| ||||||||||| ||||||||||| |||||||| Sbjct 237 CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGTCAGGGACG 294 Query 109 TAATACAACGCAAGCT 124 |||| ||||||| ||| Sbjct 295 TAAT-CAACGCATGCT 309 >seq120291 Length=6334 Score = 87.8 bits (96), Expect = 1e-15 Identities = 60/65 (92%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||||| ||||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 6219 TCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 6162 Query 108 GTAAT 112 ||||| Sbjct 6161 GTAAT 6157 >seq205015 Length=52552 Score = 80.6 bits (88), Expect = 2e-13 Identities = 57/63 (90%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| ||||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 8316 TTCAATCGGTAG-AAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 8373 Query 122 GCT 124 ||| Sbjct 8374 GCT 8376 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 23974 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 24031 Query 122 GCT 124 ||| Sbjct 24032 GCT 24034 >seq82360 Length=104158 Score = 77.0 bits (84), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 3/68 (4%) Strand=Plus/Minus Query 57 GCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAA 116 |||||| || ||||||| | ||||||||||| |||||||||||||||||||||| | ||| Sbjct 61924 GCCATT-CAGTCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAA 61868 Query 117 CGCAAGCT 124 ||| |||| Sbjct 61867 CGCGAGCT 61860 >seq251811 Length=1913 Score = 75.2 bits (82), Expect = 7e-12 Identities = 61/70 (87%), Gaps = 3/70 (4%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 1847 TCCGAACGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 1903 Query 99 GGCAGGGACG 108 | |||||||| Sbjct 1904 GTCAGGGACG 1913 >seq199870 Length=110193 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 28993 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 28936 Query 122 GCT 124 ||| Sbjct 28935 GCT 28933 >seq187076 Length=2499 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 339 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 396 Query 122 GCT 124 ||| Sbjct 397 GCT 399 >seq58340 Length=9810 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 8741 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 8798 Query 122 GCT 124 ||| Sbjct 8799 GCT 8801 >seq126513 Length=66867 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | ||||| | Sbjct 3647 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGTGA 3590 Query 122 GCT 124 ||| Sbjct 3589 GCT 3587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299392196780