Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= AAMG01001436.1 Length=198 Score E Sequences producing significant alignments: (Bits) Value seq464688 123 3e-26 seq117548 107 2e-21 >seq464688 Length=343 Score = 123 bits (136), Expect = 3e-26 Identities = 128/165 (78%), Gaps = 6/165 (4%) Strand=Plus/Minus Query 32 GGCGTTGTTGATCGCCAGCTCCGCCAGG-GCCAGGCCCAGTTCCGGATGCTC--GTTGAG 88 |||| || |||||||||||| ||||| || || | || |||| || ||| || Sbjct 312 GGCGCTGGAGATCGCCAGCTCAGCCAGCTGCTCTGC---GATCTGGATATTCTGGTTCAG 256 Query 89 CCACAGGCTGAAGGCGTCCTTGACCACGCCAGAGACAAACGCCGCTGCCTCGCGGGACGA 148 ||||||||||||||| || || ||||||||||||||||| || || || || || || Sbjct 255 CCACAGGCTGAAGGCATCTTTTACCACGCCAGAGACAAAGGCTGCGCACTGACGTGAAGA 196 Query 149 CAGGCGCTCCTTGGTCTGCCCGGAGAATTGCGGTTCCTGCATCTT 193 |||||||| ||||||||||||| ||| ||||| |||||||| || Sbjct 195 GAGGCGCTCTTTGGTCTGCCCGGCGAACTGCGGATCCTGCATTTT 151 >seq117548 Length=24029 Score = 107 bits (118), Expect = 2e-21 Identities = 92/114 (81%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 80 CTCGTTGAGCCACAGGCTGAAGGCGTCCTTGACCACGCCAGAGACAAACGCCGCTGCCTC 139 || ||| ||||||||||||||||| || || |||||||| || ||||| || || || Sbjct 1017 CTGGTTCAGCCACAGGCTGAAGGCATCTTTCACCACGCCGGAAACAAAGGCGGCGCACTG 958 Query 140 GCGGGACGACAGGCGCTCCTTGGTCTGCCCGGAGAATTGCGGTTCCTGCATCTT 193 ||| || || |||||||| ||||||||||||| || ||||| |||||||| || Sbjct 957 GCGCGAAGAGAGGCGCTCTTTGGTCTGCCCGGCAAACTGCGGATCCTGCATTTT 904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531815532883