Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= AAMG01001674.1 Length=313 Score E Sequences producing significant alignments: (Bits) Value seq61130 98.7 2e-18 seq202025 84.2 4e-14 >seq61130 Length=634 Score = 98.7 bits (108), Expect = 2e-18 Identities = 141/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 8 GATCACATGCTGGAAATCGCCGTTGAAGACGAAGAGATTGTCCAGCGTATTGCTGGCCGT 67 |||||| ||||||| | ||||| || ||| ||| || ||||||| | |||||| Sbjct 202 GATCACGTGCTGGAGTTTGCCGTACCGGATGAACTGATCGTTGAGCGTATCGTGGGCCGT 143 Query 68 CGCGTACAAGAAGCC-TCGGGCCGCGTGTACCACACCGTCTACAATCCGCCAAAGGTTGC 126 ||||| || | ||| || |||||||| || ||| | | ||||| || || || | Sbjct 142 CGCGTTCAC-ACGCCATCAGGCCGCGTTTATCACGTCACTTTTAATCCACCGAAAGTGGA 84 Query 127 AGGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCGCAAGGACGACACCGAAGAAAC 186 |||||| || ||||||||||||||||| ||| ||| || ||||| ||||| || Sbjct 83 AGGCAAAGATGATGTGACCGGCGAAGAGCTGACCATGCGTAAAGACGATCAGGAAGAGAC 24 Query 187 CGTTCGTCACCGCCTG 202 ||| ||| | |||||| Sbjct 23 CGTGCGTAAGCGCCTG 8 >seq202025 Length=20890 Score = 84.2 bits (92), Expect = 4e-14 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 12 ACATGCTGGAAATCGCCGTTGAAGACGAAGAGATTGTCCAGCGTATTGCTGGCCGTCGCG 71 || ||||||| |||| || || ||| ||| || ||||||| | ||| || |||| Sbjct 12804 ACGTGCTGGAGTTCGCGGTACCTGATGAACTGATCGTTGAGCGTATCGTTGGTCGCCGCG 12745 Query 72 TACAAGAAGCCTCGGGCCGCGTGTACCACACCGTCTACAATCCGCCAAAGGTTGCAGGCA 131 |||| | | || |||||||| ||||| | |||||| ||||| || | ||| | Sbjct 12744 TACACGCGCCGTCTGGCCGCGTTTACCATGTGACGTTCAATCCACCAAAAGTGGAAGGGA 12685 Query 132 AGGACGATGTGACCGGCGAAGACCTGGTACAGCGCAAGGACGACACCGAAGAAACCGTTC 191 | ||||| | |||||||||||| ||| ||| || || ||| ||||| ||||| | Sbjct 12684 AAGACGACGCGACCGGCGAAGAGCTGACCACGCGTAAAGATGACCAGGAAGAGACCGTGC 12625 Query 192 GTCACCGCCTG 202 || | || ||| Sbjct 12624 GTAAGCGTCTG 12614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 894711004768