Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq155833 289 8e-76 seq496998 251 2e-64 seq209348 212 2e-52 seq327750 109 1e-21 >seq155833 Length=1813 Score = 289 bits (320), Expect = 8e-76 Identities = 318/422 (75%), Gaps = 6/422 (1%) Strand=Plus/Plus Query 3 ATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCC 62 ||||| ||||||||||| || || ||||| | || |||||||| || || || || || Sbjct 346 ATCAGAAACACTTCACGCGCGCCTGCGCCCTGAGCGGATTCACGAATCGCGCGGCGTTCA 405 Query 63 ACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACTG 122 ||||| || | | | || ||||||| ||||||||| |||||||| ||| |||||| Sbjct 406 ACCTGTGTTGCCCCGACGGGTACGCAGACCAGCACACGCGGGCTGGGACGCATAAAACTG 465 Query 123 TTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCG 182 || |||||||| |||||||||| ||||||||||| ||| ||| |||||| || Sbjct 466 TTGCTGTGAACCTGCTTGATGAAGTGTTGCAGCATCTTTTCGGTCACGAAGAAGTCAGCA 525 Query 183 ATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATG 242 || ||||| ||||||||||||||||| || || ||||||||||| |||||||| ||||| Sbjct 526 ATAACGCCATCTTTCATCGGACGAATCGCTGCGATATTGCCTGGCGTACGGCCAAGCATC 585 Query 243 CGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTC--TGA----TTACCATGGGTCCGA 296 | |||||||| || ||||| | ||||||||| ||| || || ||| Sbjct 586 TGTTTGGCCTCATGACCCACGGCCGCAACACTTTTCGGTGAACCGGCACGATCCTGTCGA 645 Query 297 ATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTG 356 || || || || || ||||| ||||| ||||| || | | ||||||||| ||||| Sbjct 646 ATAGCGACGACGGAGGGCTCGTTCAGTACGATGCCCTGTCCTTTCACGTAAATCAGGGTA 705 Query 357 TTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAAC 416 || || || |||||||||||||| | ||| |||||||||||||||| | ||| || ||| Sbjct 706 TTCGCGGTACCCAGGTCAATGGACAAGTCGTTGGAAAACATGCCACGAAATTTTTTAAAC 765 Query 417 AT 418 || Sbjct 766 AT 767 >seq496998 Length=1578 Score = 251 bits (278), Expect = 2e-64 Identities = 311/423 (74%), Gaps = 8/423 (2%) Strand=Plus/Minus Query 3 ATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCC 62 ||||||||||||||||| || || ||||| | || ||||| || |||||||| || || Sbjct 868 ATCAGGAACACTTCACGTGCCCCAGCGCCCTGCGCGGATTCGCGAATGGCACGGCGTTCG 809 Query 63 ACCTGGGTGG-ACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACT 121 ||||| || | || | | ||| || || | |||||| || ||||| || ||| ||| || Sbjct 808 ACCTGAGTCGCACCTAC-CGGTACACACACCAGCACGCGCGGGCTTGGGCGCATGAAGCT 750 Query 122 GTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGC 181 ||| |||||||| ||||| |||| ||||||||| || ||| ||| ||||||||| Sbjct 749 GTTGCTGTGAACCTGTTTGATAAAGTGCTGCAGCATTTTTTCGGTGACAAAGAAGTCGGC 690 Query 182 GATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCAT 241 ||| ||||| |||||||| || ||||| || || |||||||| || ||||| || ||||| Sbjct 689 GATAACGCCATCTTTCATTGGGCGAATAGCTGCGATATTGCCGGGGGTACGACCCAGCAT 630 Query 242 GCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACC------ATGGGTCCG 295 | ||||| || ||||| || | || ||||| | ||| || || Sbjct 629 CTGTTTGGCGTCATGACCGACTGCCGCCACGCTTTTAGGGGAACCGGCACGATCCTGACG 570 Query 296 AATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGT 355 || || || || || |||||||| || || || || || | ||||||||| ||||| Sbjct 569 GATAGCAACGACGGAAGGCTCATTAAGAACAATGCCCTGCCCTTTCACGTAAATCAGGGT 510 Query 356 GTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAA 415 ||||| || |||||||| ||||| | ||| |||||||||||||||| | ||| || || Sbjct 509 ATTGGCGGTACCCAGGTCGATGGACAAGTCGTTGGAAAACATGCCACGGAATTTTTTAAA 450 Query 416 CAT 418 ||| Sbjct 449 CAT 447 >seq209348 Length=6111 Score = 212 bits (234), Expect = 2e-52 Identities = 301/424 (71%), Gaps = 6/424 (1%) Strand=Plus/Plus Query 1 CGATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 60 |||| ||||| ||||| || ||||||||||| | || ||||||||||| || ||||| Sbjct 840 CGATAAGGAAGACTTCGCGCGCACCGGCGCCTAACGCTGATTCACGGATAGCTTTACGCT 899 Query 61 CCACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAAC 120 | || || || | ||| || || | || || || ||||| || ||| || | Sbjct 900 CAACTTGCGTCGCGCCAACCGGTACACAAACCAATACGCGTGGGCTTGGGCGCATAAAGC 959 Query 121 TGTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGG 180 |||| ||| || | || || |||| ||| ||||| || || || ||||| | Sbjct 960 TGTTGCTGTGGACTTGCTTAATAAAGTGCTGAAGCATTTTTTCAGTCACAAAAAAGTCAG 1019 Query 181 CGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCA 240 | || || ||||||||||| ||||||||||| || ||||| | || |||||||| |||| Sbjct 1020 CTATGACACCGTCTTTCATTGGACGAATGGCCGCGATATTACTCGGCGTACGGCCAAGCA 1079 Query 241 TGCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACC------ATGGGTCC 294 | |||| ||| | ||| || ||| | || ||||| | ||| || | Sbjct 1080 TTTGCTTAGCCCCTTGGCCCACCGCAGCAACGCTTTTTGGCGAACCGGCGCGATCTTGGC 1139 Query 295 GAATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGG 354 |||| |||||||| || ||||||||||| ||||| || || | || ||||| |||| Sbjct 1140 GAATTGCCACAACGGAAGGCTCATTCAGAACGATGCCTTGCCCTTTTACATAAATCAGGG 1199 Query 355 TGTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGA 414 | |||||||| |||||||||||||| || || | |||||||||||||| | ||| || | Sbjct 1200 TATTGGCAGTACCCAGGTCAATGGACAGGTCATTAGAAAACATGCCACGAAATTTTTTAA 1259 Query 415 ACAT 418 |||| Sbjct 1260 ACAT 1263 >seq327750 Length=209 Score = 109 bits (120), Expect = 1e-21 Identities = 87/105 (83%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 314 CTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGCAGTGCCCAGGTC 373 ||| ||||| ||||| || || | ||||| || || ||||||||||| ||||||||||| Sbjct 1 CTCGTTCAGCACGATTCCCTGCCCACGCACATAGATGAGGGTGTTGGCCGTGCCCAGGTC 60 Query 374 AATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACAT 418 ||||| || || |||| |||||||| ||||||||||||||||| Sbjct 61 GATGGACAGGTCATTGGAGAACATGCCGCGCAGTTTCTTGAACAT 105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1346842544544