Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq154911 214 2e-53 seq159372 165 8e-39 seq196592 138 1e-30 seq180115 136 4e-30 seq137086 131 2e-28 seq84541 125 7e-27 seq14570 118 1e-24 seq221079 91.5 1e-16 seq287619 87.8 2e-15 seq489525 82.4 7e-14 seq262202 78.8 9e-13 seq109255 78.8 9e-13 seq255604 75.2 1e-11 seq70820 75.2 1e-11 seq66834 75.2 1e-11 seq44964 75.2 1e-11 seq23470 73.4 4e-11 >seq154911 Length=3834 Score = 214 bits (236), Expect = 2e-53 Identities = 141/156 (90%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct 2627 GTTGAGCGATGGCCCTTCCATGCAGAACCACCGGATCACTAAGACCTGCTTTCGCACCTG 2568 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 |||| | | |||| ||| ||||||| | ||||||||| ||||||||||||||||||||| Sbjct 2567 CTCGCGTCATCACGCTCACAGTCAAACTGGCTTATGCCTTTGCACTAACCTCACGATGTC 2508 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||||||||||| | |||||| ||||||||||| Sbjct 2507 CGACCGTGATTAGCCAATCTTCGTACTCCTCCGTTA 2472 >seq159372 Length=6624 Score = 165 bits (182), Expect = 8e-39 Identities = 130/156 (83%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| ||||||||||||||||||| | ||| |||| ||||| Sbjct 5209 GTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTAAGTCCTAGTTTCCTACCTG 5150 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 || || ||||| ||| |||||||||| ||||||||| |||||| | | ||||||| Sbjct 5149 CTTGATCCGTCGATCTTGCAGTCAAGCACGCTTATGCCTTTGCACACAGTGCGCGATGTC 5090 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | | ||| |||||||||||||||||||| Sbjct 5089 CGACCGCGCTGAGCGTACCTTCGTGCTCCTCCGTTA 5054 >seq196592 Length=905 Score = 138 bits (152), Expect = 1e-30 Identities = 124/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| || | ||||||||||||||||| || |||||| ||| Sbjct 749 GTTGAGCGATGGCCCTTCCACTCGGGACCACCGGATCACTATGGCCGACTTTCGTCTCTG 808 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| |||| ||| ||||||| || |||| |||||||||||| | | |||| || Sbjct 809 CTCGACTTGTCAGTCTTGCAGTCAGGCTGGCTTCTGCCATTGCACTCAACGACCGATTTC 868 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | ||| ||||||| || ||||||||| Sbjct 869 CGACCGGTCTGAGCCAACCTTCGCGCGCCTCCGTTA 904 >seq180115 Length=3539 Score = 136 bits (150), Expect = 4e-30 Identities = 123/156 (79%), Gaps = 9/156 (6%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| ||||||||||||||||||| | ||| |||| ||||| Sbjct 2371 GTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTAAGTCCTAGTTTCCTACCTG 2430 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 || || ||||| ||| |||||||||| ||||||||| |||||| | | ||||||| Sbjct 2431 CTTGATCCGTCGATCTTGCAGTCAAGCACGCTTATGCCTTTGCACACAGTGCGCGATGTC 2490 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||| ||| ||||||| ||||||||||| Sbjct 2491 CGAGCGT---------ACCTTCGAACTCCTCCGTTA 2517 >seq137086 Length=2341 Score = 131 bits (144), Expect = 2e-28 Identities = 122/155 (79%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84 |||||||||||||||||||| ||||||||||||||||||||| || |||||| |||| Sbjct 1931 TTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTATGTCCGTCTTTCGACCCTGT 1990 Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTCC 144 |||| ||| |||| ||||||||| |||||||||||||||||| | ||| | || Sbjct 1991 TCGACTTGTCGGTCTCACAGTCAAGCAAGCTTATGCCATTGCACTCCGCGTACGGTTACC 2050 Query 145 GACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | ||| | |||| ||||| | ||||||||| Sbjct 2051 AAGCGTACTGAGCTTACCTTTGAAAGCCTCCGTTA 2085 >seq84541 Length=1228 Score = 125 bits (138), Expect = 7e-27 Identities = 120/154 (78%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 26 TGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCT 85 ||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||| | Sbjct 489 TGAGCGATGGCCCTTCCATACGGAACCACCGGATCACTATGTCCTGCTTTCGCACCTGAT 430 Query 86 CGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTCCG 145 ||| || |||| ||||||||| ||||||||||| |||| | |||| | || Sbjct 429 CGACTTGTAGGTCTCACAGTCAAGCACCCTTATGCCATTACACTCTACGCACGGTTACCA 370 Query 146 ACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | |||| | || ||||| | ||||||||| Sbjct 369 AGCGTGCTGAGGGTACCTTTGAAAGCCTCCGTTA 336 >seq14570 Length=1081 Score = 118 bits (130), Expect = 1e-24 Identities = 124/162 (77%), Gaps = 6/162 (4%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| | |||||||||||||||||||| |||||| ||| Sbjct 744 GTTGAGCGATGGCCCTTCCACGAGGGACCACCGGATCACTATGACCGACTTTCGTCTCTG 685 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT----AACC--TCAC 137 ||||| |||| ||||||||||| || ||||||||||||||||| ||| | | Sbjct 684 CTCGACTTGTCAGTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCGACGACCGATTCC 625 Query 138 GATGTCCGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | | ||| |||| | ||| ||| ||| || ||||||||| Sbjct 624 GGTTTCCAACCGGCCTGAGCCCACCATCGCGCGCCTCCGTTA 583 >seq221079 Length=5884 Score = 91.5 bits (100), Expect = 1e-16 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84 |||||||||||| ||||||| | ||||||||||||||| | ||| ||| || | |||| Sbjct 2114 TTGAGCGATGGCTTTTCCATTAAACACCACCGGATCACTAAGTCCTACTTACGTATCTGC 2173 Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 | || |||| ||| ||||| |||| ||||||||| || |||| || Sbjct 2174 TTGACTTGTCAGTCTTGCAGTTAAGCATGCTTATGCCTTTACACTTAC 2221 >seq287619 Length=424039 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||| |||||||| || | |||| |||||||||| | || |||||| ||| Sbjct 110645 GTTGAGCGATGCCCCTTCCACTCGGCACCATCGGATCACTAAGGCCGACTTTCGTCTCTG 110704 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 ||||| || | ||| |||||||||| ||| |||| ||||||| Sbjct 110705 CTCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 110750 >seq489525 Length=673 Score = 82.4 bits (90), Expect = 7e-14 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84 |||||||||| || ||||||| ||| |||||||||||||| ||| ||| || | ||| Sbjct 3 TTGAGCGATGACCATTCCATTATGAATCACCGGATCACTATATCCTACTTGCGTATCTGA 62 Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATT 124 |||| | ||| ||| ||||||||| |||||| | ||| Sbjct 63 TCGACCTATCAGTCTTTCAGTCAAGCATGCTTATACTATT 102 >seq262202 Length=5568 Score = 78.8 bits (86), Expect = 9e-13 Identities = 93/126 (74%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 54 CCGGATCACTATGACCTGCTTTCGCACCTGCTCGAGCCGTCACTCTCGCAGTCAAGCCAG 113 ||||||||||| ||||||||||||||||||||| |||| |||| ||||||||| Sbjct 5068 CCGGATCACTAGTCCCTGCTTTCGCACCTGCTCGACACGTCCGTCTCACAGTCAAGCTCC 5009 Query 114 CTTATGCCATTGCACTAACCTCACGATGTCCGACCGTGATTAGCTGACCTTCGTGCTCCT 173 ||| ||| || |||| | | | ||| || ||| | | || ||||| | || ||| Sbjct 5008 CTTGTGCACTTACACTCAACACCTGATTGCCAACCAGGCTGAGGGAACCTTTGGGCGCCT 4949 Query 174 CCGTTA 179 |||||| Sbjct 4948 CCGTTA 4943 >seq109255 Length=18142 Score = 78.8 bits (86), Expect = 9e-13 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||| |||||||| || | ||| | |||||||| | || |||||| ||| Sbjct 82 GTTGAGCGATGACCCTTCCACTCGGCACCGTCAGATCACTAAGGCCGACTTTCGTCTCTG 141 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 ||||| || | ||| |||||||||| ||| |||| ||||||| Sbjct 142 CTCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 187 >seq255604 Length=181724 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||| |||| ||||||||| | | || ||||||||||||| || |||||| ||| Sbjct 165344 GTTGGGCGAGAGCCCTTCCACACGGGACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 165403 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | |||| |||| |||||| || |||||| ||||| | || || Sbjct 165404 TTCGACCAGTCAGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 165452 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| | | || ||||||||||||| || |||||| ||| Sbjct 173177 GTTGAGCGAGAGCCCTTCCACACGGGACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 173236 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | ||| |||| |||||| || |||||| ||||| | || || Sbjct 173237 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 173285 >seq70820 Length=704 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| | |||| ||||||||||||| || |||| | ||| Sbjct 589 GTTGAGCGAGAGCCCTTCCACACGGAACTCCCGGATCACTATGGCCGACTTTTGTCTCTG 648 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | ||| |||| |||||| || |||||| ||||| | || || Sbjct 649 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 697 >seq66834 Length=83994 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| | | || ||||||||||||| || |||||| ||| Sbjct 26699 GTTGAGCGAGAGCCCTTCCACACGGGACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 26758 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | ||| |||| |||||| || |||||| ||||| | || || Sbjct 26759 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 26807 >seq44964 Length=154011 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||||||||| | || ||||||||||||| || |||||| ||| Sbjct 75125 GTTGAGCGAGAGCCCTTCCACAAGGGACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 75184 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132 |||| | ||| |||| ||||||||| |||||| ||||| | || || Sbjct 75185 TTCGACCAGTCGGTCTCACAGTCAAGCAGGCTTATACCATTACGCTCAC 75233 >seq23470 Length=45992 Score = 73.4 bits (80), Expect = 4e-11 Identities = 72/93 (77%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84 |||||||||| || ||||||| ||| |||||||||||||| ||| ||| || | ||| Sbjct 44433 TTGAGCGATGACCATTCCATTATGAATCACCGGATCACTATATCCTACTTGCGTATCTGA 44492 Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTA 117 | || | ||| ||| ||||||||| ||||| Sbjct 44493 TTGACCTATCAGTCTTTCAGTCAAGCATGCTTA 44525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471309574052