Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= AAMG01002011.1 Length=284 Score E Sequences producing significant alignments: (Bits) Value seq243121 163 5e-38 seq262128 152 8e-35 seq385089 95.1 2e-17 >seq243121 Length=1196 Score = 163 bits (180), Expect = 5e-38 Identities = 202/275 (73%), Gaps = 1/275 (0%) Strand=Plus/Plus Query 10 CGGCCGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCTGCTACGTCT 69 |||||||| ||||| | |||||||| | | |||| | | ||| ||||||| || Sbjct 916 CGGCCGCTCGATTTTAGTATCTTCCCGACCT-TACTGCTTATCACTACCTTGCTACGGCT 974 Query 70 GGCATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGGCCATGCCGC 129 |||||||||| ||||| || ||||| || | || || || || || || | | || Sbjct 975 ATCATTGAACGTTGCCTCAACTCGGGTAGTCTTACTGCATGGACATGAGGGGGAAGGTGC 1034 Query 130 TGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCGG 189 || ||||| |||||| | ||||||||| | |||||||||||||| | | |||||||| Sbjct 1035 AGCAGGTAAAGTGATCGAAGCCTTCGGTCAAGTGGTGATCGGCGGCGATTTTGTGGTCGG 1094 Query 190 TATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAAGGGCGCCGG 249 | | ||||| ||| || |||||||| | ||||||||||| | |||||||| || | Sbjct 1095 TTTAGTGGTTTTCATTATTCTGATGATTGTTAACTTTGTGGTCATCACCAAGGGGGCTGA 1154 Query 250 GCGGATTTCCGAGGTGAGCGCGCGGTTTACCCTCG 284 |||||||| ||||| || || |||||||||| Sbjct 1155 ACGGATTTCTGAGGTATCGGCTCGTTTTACCCTCG 1189 >seq262128 Length=18614 Score = 152 bits (168), Expect = 8e-35 Identities = 193/264 (73%), Gaps = 1/264 (0%) Strand=Plus/Plus Query 14 CGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCTGCTACGTCTGGCA 73 ||||||| ||||| | |||||||| ||||||| | | | ||| | |||| ||||| Sbjct 16928 CGCTGGAGTTCGCCGCTTTCCCGACC-ATTCTGCTGTTCTCCACCTTATTACGCCTGGCG 16986 Query 74 TTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGGCCATGCCGCTGCC 133 | ||||| ||||||||||| | | || | | ||||| ||| || |||||| Sbjct 16987 CTCAACGTGGCCTCCACGCGTATTATTCTGATGGAAGGCCACACCGGGGCGGCGGCTGCC 17046 Query 134 GGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCGGTATC 193 || ||||| | | ||||| ||| | | || | |||||||||| || |||||||| Sbjct 17047 GGACAGGTGGTGGAAGCCTTTGGTCACTTCCTGGTGGGCGGTAACTTCGCCATCGGTATC 17106 Query 194 GTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAAGGGCGCCGGGCGG 253 |||||||| |||||| | |||||||||||| |||| | |||||||| |||||||| Sbjct 17107 GTGGTGTTTATCATCCTGGTCATCATCAACTTTATGGTCATTACCAAGGGTGCCGGGCGT 17166 Query 254 ATTTCCGAGGTGAGCGCGCGGTTT 277 ||| |||| ||| ||||||| ||| Sbjct 17167 ATTGCCGAAGTGGGCGCGCGCTTT 17190 >seq385089 Length=232 Score = 95.1 bits (104), Expect = 2e-17 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 188 GGTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAAGGGCGCC 247 || ||||| | ||||||||||||| |||||||| ||||||||| | |||||||||||| Sbjct 231 GGCATCGTCGCCTTCGCGATCCTGACCATCATCAATTTTGTGGTGATCACCAAGGGCGCC 172 Query 248 GGGCGGATTTCCGAGGTGAGCGCGCGGTTTACCCTCG 284 ||||| | ||||| |||| ||| || || | ||||| Sbjct 171 GGGCGCGTGTCCGAAGTGACCGCACGCTTCATCCTCG 135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 805684609697