Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02]
499,221 sequences; 3,747,047,519 total letters
Query= AAMG01002049.1
Length=571
Score E
Sequences producing significant alignments: (Bits) Value
seq99238 129 2e-27
seq44175 105 2e-20
>seq99238
Length=3128
Score = 129 bits (142), Expect = 2e-27
Identities = 290/430 (67%), Gaps = 12/430 (3%)
Strand=Plus/Minus
Query 16 TTCAGGTCGTTCCGGGTCAAGGTCGGCCAGGGCTTCCTGATGATCTTCACCGGTCTAGTT 75
||| |||| ||||| || | ||| | | |||| | |||||||| | | | || | | |
Sbjct 862 TTCTGGTCCTTCCGCGTGATGGTGGCGCTGGGCCTGCTGATGAT-TACGCTGGGCGTGGT 804
Query 76 CAGCCAGTGGCTAGCGCCG----GGGCGACAAGATGTACACGTCCAAGCCGTTCCTGTAC 131
||||| |||||| ||| ||||| | ||| ||| || |||||||
Sbjct 803 CAGCCTGTGGCT-GCGTTTCAAAGGGCGTCTCTATGA----GTCGCGTCCTTTCCTGTGG 749
Query 132 CTGGCGTTGTGGATGGGCCCGTCCGGGTTGATCGCGATTCTCGCCGGCTGGTTCACCACG 191
| ||| ||| |||||| || || || |||| |||||||| || |||||||| |||||
Sbjct 748 TTTGCGCTGTTGATGGGGCCCTCGGGTCTGATTGCGATTCTGGCAGGCTGGTTTACCACT 689
Query 192 GAAATCGGCCGTCAGCCGTGGGTGGTCTACGGCCTGATGCGCACGGCGGATGCGTCCTCC 251
|||||||| |||||||||||||||||||| ||| || ||||||| |||||| |||
Sbjct 688 GAAATCGGTCGTCAGCCGTGGGTGGTCTATGGCGTGCAGCGCACGATTGATGCGGTCTCG 629
Query 252 GGGCATAGCCTGGTGCAGATGACGATTACGCTGGTGTTGTTCGTGGTGGTGTACTTCGCG 311
| ||| | |||| |||| || | ||| || || | |||| ||| | ||
Sbjct 628 GCACATGGGGATATGCACATGAGCATCAGCCTGCTGGCCTTTATTCTGGTCTACAGCTCG 569
Query 312 CTGTTCGGTGCCGGTCTGGGCTACATGATGCGCCTGGTGCGCAAAGGTCCGCAGACCCAC 371
||||||| | || |||||||||||| ||| | | || ||| ||| |
Sbjct 568 GTGTTCGGCGTGGGGTATCACTACATGATGCGTCTGATTAAGCAGGGACCGGTTACCGGC 509
Query 372 GAAGGCGAT-GAGCCGACCCACGGTGGTCCTGGCCAGAAACGCACGCCAGCCCGTCCGTT 430
|||||| || |||| | ||||||||||| ||||| || || || |||||| |
Sbjct 508 GAAGGCCATATCACCGA-AGAGGGTGGTCCTGGTCAGAAGAAAACCCCGGCGCGTCCGCT 450
Query 431 GTCTGCCGCC 440
|| || |||
Sbjct 449 TTCCGCTGCC 440
>seq44175
Length=5862
Score = 105 bits (116), Expect = 2e-20
Identities = 164/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 4 TCGACCGTCGAGTTCAGGTCGTTCCGGGTCAAGGTCGGCCAGGGCTTCCTGATGATCTTC 63
|| ||||| | |||| |||| ||||| || | ||| | | |||| | ||||||||| |
Sbjct 4606 TCCACCGTGGTGTTCTGGTCATTCCGCGTGATGGTGGCGCTGGGCATGCTGATGATCCTG 4665
Query 64 ACCGGTCTAGTTCAGCCAGTGGCTAGCGCCGGGGCGACAAGATGTACACGTCCAAGCCGT 123
|| | ||| |||| |||| | ||| || || | |||| || || | |
Sbjct 4666 TTGGGCGTGGTT-AGCCTGTGGAT-GCGTCGCGGACAGCGTCTGTATACCTCGCGTGCAT 4723
Query 124 TCCTGTACCTGGCGTTGTGGATGGGCCCGTCCGGGTTGATCGCGATTCTCGCCGGCTGGT 183
|||||| | | | || |||||| || || || |||| ||| | |||| ||||||
Sbjct 4724 TCCTGTGGTTTGTGCTGCTGATGGGGCCATCAGGTCTGATTGCGCTGGTCGCAGGCTGGA 4783
Query 184 TCACCACGGAAATCGGCCGTCAGCCGTGGGTGGTCTACGGCCTGATGCGCAC 235
||||||| ||||| || |||||||||||||| ||||||||||| |||||||
Sbjct 4784 TCACCACCGAAATGGGTCGTCAGCCGTGGGTCATCTACGGCCTGCTGCGCAC 4835
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1716189436192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |