Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= AAMG01002049.1 Length=571 Score E Sequences producing significant alignments: (Bits) Value seq99238 129 2e-27 seq44175 105 2e-20 >seq99238 Length=3128 Score = 129 bits (142), Expect = 2e-27 Identities = 290/430 (67%), Gaps = 12/430 (3%) Strand=Plus/Minus Query 16 TTCAGGTCGTTCCGGGTCAAGGTCGGCCAGGGCTTCCTGATGATCTTCACCGGTCTAGTT 75 ||| |||| ||||| || | ||| | | |||| | |||||||| | | | || | | | Sbjct 862 TTCTGGTCCTTCCGCGTGATGGTGGCGCTGGGCCTGCTGATGAT-TACGCTGGGCGTGGT 804 Query 76 CAGCCAGTGGCTAGCGCCG----GGGCGACAAGATGTACACGTCCAAGCCGTTCCTGTAC 131 ||||| |||||| ||| ||||| | ||| ||| || ||||||| Sbjct 803 CAGCCTGTGGCT-GCGTTTCAAAGGGCGTCTCTATGA----GTCGCGTCCTTTCCTGTGG 749 Query 132 CTGGCGTTGTGGATGGGCCCGTCCGGGTTGATCGCGATTCTCGCCGGCTGGTTCACCACG 191 | ||| ||| |||||| || || || |||| |||||||| || |||||||| ||||| Sbjct 748 TTTGCGCTGTTGATGGGGCCCTCGGGTCTGATTGCGATTCTGGCAGGCTGGTTTACCACT 689 Query 192 GAAATCGGCCGTCAGCCGTGGGTGGTCTACGGCCTGATGCGCACGGCGGATGCGTCCTCC 251 |||||||| |||||||||||||||||||| ||| || ||||||| |||||| ||| Sbjct 688 GAAATCGGTCGTCAGCCGTGGGTGGTCTATGGCGTGCAGCGCACGATTGATGCGGTCTCG 629 Query 252 GGGCATAGCCTGGTGCAGATGACGATTACGCTGGTGTTGTTCGTGGTGGTGTACTTCGCG 311 | ||| | |||| |||| || | ||| || || | |||| ||| | || Sbjct 628 GCACATGGGGATATGCACATGAGCATCAGCCTGCTGGCCTTTATTCTGGTCTACAGCTCG 569 Query 312 CTGTTCGGTGCCGGTCTGGGCTACATGATGCGCCTGGTGCGCAAAGGTCCGCAGACCCAC 371 ||||||| | || |||||||||||| ||| | | || ||| ||| | Sbjct 568 GTGTTCGGCGTGGGGTATCACTACATGATGCGTCTGATTAAGCAGGGACCGGTTACCGGC 509 Query 372 GAAGGCGAT-GAGCCGACCCACGGTGGTCCTGGCCAGAAACGCACGCCAGCCCGTCCGTT 430 |||||| || |||| | ||||||||||| ||||| || || || |||||| | Sbjct 508 GAAGGCCATATCACCGA-AGAGGGTGGTCCTGGTCAGAAGAAAACCCCGGCGCGTCCGCT 450 Query 431 GTCTGCCGCC 440 || || ||| Sbjct 449 TTCCGCTGCC 440 >seq44175 Length=5862 Score = 105 bits (116), Expect = 2e-20 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 4 TCGACCGTCGAGTTCAGGTCGTTCCGGGTCAAGGTCGGCCAGGGCTTCCTGATGATCTTC 63 || ||||| | |||| |||| ||||| || | ||| | | |||| | ||||||||| | Sbjct 4606 TCCACCGTGGTGTTCTGGTCATTCCGCGTGATGGTGGCGCTGGGCATGCTGATGATCCTG 4665 Query 64 ACCGGTCTAGTTCAGCCAGTGGCTAGCGCCGGGGCGACAAGATGTACACGTCCAAGCCGT 123 || | ||| |||| |||| | ||| || || | |||| || || | | Sbjct 4666 TTGGGCGTGGTT-AGCCTGTGGAT-GCGTCGCGGACAGCGTCTGTATACCTCGCGTGCAT 4723 Query 124 TCCTGTACCTGGCGTTGTGGATGGGCCCGTCCGGGTTGATCGCGATTCTCGCCGGCTGGT 183 |||||| | | | || |||||| || || || |||| ||| | |||| |||||| Sbjct 4724 TCCTGTGGTTTGTGCTGCTGATGGGGCCATCAGGTCTGATTGCGCTGGTCGCAGGCTGGA 4783 Query 184 TCACCACGGAAATCGGCCGTCAGCCGTGGGTGGTCTACGGCCTGATGCGCAC 235 ||||||| ||||| || |||||||||||||| ||||||||||| ||||||| Sbjct 4784 TCACCACCGAAATGGGTCGTCAGCCGTGGGTCATCTACGGCCTGCTGCGCAC 4835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1716189436192