Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq263398 125 1e-26 seq214369 102 1e-19 seq72381 102 1e-19 >seq263398 Length=4726 Score = 125 bits (138), Expect = 1e-26 Identities = 148/199 (74%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 96 GCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACC 155 || ||||| ||||| | | || | || ||||| ||||| ||||||| ||||| ||||| Sbjct 2354 GCCAGGAACGCTTCCT-GCGGCAACTCAACGTTACCCACCTGCTTCATACGTTTCTTACC 2412 Query 156 GGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGC 215 | | || || |||| |||||||| ||||||||| ||||||||||| ||||| || || Sbjct 2413 GTCTTTCTGTTTCTGCAGCAGCTTTTTCTTACGGCTGACGTCACCGCCATAGCACTTAGC 2472 Query 216 CAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAATGGC 275 ||| ||||| || | || || || | | || ||||| || || ||||||||| Sbjct 2473 CAGCACGTTTTTACGCAGCTGTTTCACCGTTGAACGGGCAATAATATGGTTGCCAATGGC 2532 Query 276 GGCCTGGATCGCGACGTCG 294 ||||| ||||||| |||| Sbjct 2533 CGCCTGAATCGCGATGTCG 2551 >seq214369 Length=6957 Score = 102 bits (112), Expect = 1e-19 Identities = 149/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 81 TCCAACCTG-AGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCT 139 |||||| || || | || | ||| ||||||| |||| | || ||||| |||||| ||| Sbjct 3499 TCCAACATGCAGAATTGCTAAGAACGCTTCTT-GTGGTAACTCTACGTTACCCACTTGCT 3557 Query 140 TCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCAC 199 |||||||||| |||||| | || || || | | | || ||||||||| ||||||| Sbjct 3558 TCATGCGTTTCTTACCGTCTTTCTGTTTTTGTAATAATTTCTTCTTACGGCTCACGTCAC 3617 Query 200 CGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGA 259 | || || ||||| |||| ||||| || | | ||||||| || || || || | Sbjct 3618 CACCATAACATTTCGCCAAGACGTTTTTACGTAATTGTTTGACGGTGGAACGGGCGATAA 3677 Query 260 TCTGCCCGCCAATGGCGGCCTGGATCGC 287 | || |||||| ||||| ||||| || Sbjct 3678 TGTGGTTGCCAATTGCGGCTTGGATAGC 3705 >seq72381 Length=528 Score = 102 bits (112), Expect = 1e-19 Identities = 115/153 (75%), Gaps = 1/153 (1%) Strand=Plus/Plus Query 90 AGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTT 149 ||||| || ||||| ||||| | | |||||||||||| ||| || |||||||||| || Sbjct 377 AGCACGGCCAGGAACGCTTCCT-GCGGAATTTCCACGCGGCCGACCTGCTTCATGCGCTT 435 Query 150 TTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCA 209 || || |||| ||||| || || ||||| ||| || ||||| || || ||||| Sbjct 436 CTTGCCTTCCTTCTGCTTTTCCAGAAGCTTCTTCTTGCGCGAAACGTCGCCACCATAGCA 495 Query 210 TTTGGCCAGTACGTTCTTTCTGAGAGCCTTGAC 242 |||||||| |||||||| | | |||||||| Sbjct 496 CTTGGCCAGAACGTTCTTGCGCATGGCCTTGAC 528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 837529851187