Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31]
896 sequences; 295,462,401 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq81 390 2e-106
seq58 390 2e-106
seq10 390 2e-106
>seq81
Length=1043490
Score = 390 bits (432), Expect = 2e-106
Identities = 244/257 (95%), Gaps = 4/257 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 1038972 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 1039029
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGATT 119
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 1039030 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTTCGAAGATT 1039089
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 1039090 ACCCGGGCCTGTCGGCCAAGGCGGTAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 1039149
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAA 239
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1039150 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAAC 1039209
Query 240 GGCCAT-CTCCCTCGAA 255
| |||| |||||| ||
Sbjct 1039210 GACCATAGTCCCTCTAA 1039226
Score = 389 bits (430), Expect = 6e-106
Identities = 236/246 (96%), Gaps = 3/246 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 1021377 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 1021434
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGATT 119
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 1021435 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTTCGAAGATT 1021494
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 1021495 ACCCGGGCCTGTCGGCCAAGGCGGTAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 1021554
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAA 239
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1021555 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAAC 1021614
Query 240 GGCCAT 245
| ||||
Sbjct 1021615 GACCAT 1021620
Score = 385 bits (426), Expect = 7e-105
Identities = 244/258 (95%), Gaps = 5/258 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGC-TTACTAGGAATTT 59
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct 1030172 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCCTTACTAGGAATT- 1030229
Query 60 CCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGAT 118
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 1030230 CCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTTCGAAGAT 1030289
Query 119 TACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 1030290 TACCCGGGCCTGTCGGCCAAGGCGGTAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 1030349
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAA 238
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1030350 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAA 1030409
Query 239 AGGCCAT-CTCCCTCGAA 255
| |||| |||||| ||
Sbjct 1030410 CGACCATAGTCCCTCTAA 1030427
>seq58
Length=1363798
Score = 390 bits (432), Expect = 2e-106
Identities = 244/257 (95%), Gaps = 4/257 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 1337117 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 1337060
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGATT 119
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 1337059 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTTCGAAGATT 1337000
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 1336999 ACCCGGGCCTGTCGGCCAAGGCGGTAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 1336940
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAA 239
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1336939 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAAC 1336880
Query 240 GGCCAT-CTCCCTCGAA 255
| |||| |||||| ||
Sbjct 1336879 GACCATAGTCCCTCTAA 1336863
>seq10
Length=3646474
Score = 390 bits (432), Expect = 2e-106
Identities = 244/257 (95%), Gaps = 4/257 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 3330412 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 3330355
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGATT 119
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 3330354 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTTCGAAGATT 3330295
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 3330294 ACCCGGGCCTGTCGGCCAAGGCGGTAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 3330235
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAA 239
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3330234 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAAC 3330175
Query 240 GGCCAT-CTCCCTCGAA 255
| |||| |||||| ||
Sbjct 3330174 GACCATAGTCCCTCTAA 3330158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751993472640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |