Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31]
896 sequences; 295,462,401 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq81 125 4e-27
seq58 125 4e-27
seq10 125 4e-27
>seq81
Length=1043490
Score = 125 bits (138), Expect = 4e-27
Identities = 98/117 (84%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||||| | ||| || |||||| ||
Sbjct 1021908 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGTGTCCTAAAAGCAACATCCGCC 1021967
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||| |||||||| ||||| |||| |||||| ||||||||||||||||||||||
Sbjct 1021968 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 1022024
Score = 125 bits (138), Expect = 4e-27
Identities = 98/117 (84%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||||| | ||| || |||||| ||
Sbjct 1030703 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGTGTCCTAAAAGCAACATCCGCC 1030762
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||| |||||||| ||||| |||| |||||| ||||||||||||||||||||||
Sbjct 1030763 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 1030819
Score = 125 bits (138), Expect = 4e-27
Identities = 98/117 (84%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||||| | ||| || |||||| ||
Sbjct 1039503 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGTGTCCTAAAAGCAACATCCGCC 1039562
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||| |||||||| ||||| |||| |||||| ||||||||||||||||||||||
Sbjct 1039563 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 1039619
>seq58
Length=1363798
Score = 125 bits (138), Expect = 4e-27
Identities = 98/117 (84%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||||| | ||| || |||||| ||
Sbjct 1336586 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGTGTCCTAAAAGCAACATCCGCC 1336527
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||| |||||||| ||||| |||| |||||| ||||||||||||||||||||||
Sbjct 1336526 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 1336470
>seq10
Length=3646474
Score = 125 bits (138), Expect = 4e-27
Identities = 98/117 (84%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||||| | ||| || |||||| ||
Sbjct 3329881 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGTGTCCTAAAAGCAACATCCGCC 3329822
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||| |||||||| ||||| |||| |||||| ||||||||||||||||||||||
Sbjct 3329821 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 3329765
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278397661440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |