Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31]
896 sequences; 295,462,401 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq321 145 1e-32
seq208 145 1e-32
>seq321
Length=132638
Score = 145 bits (160), Expect = 1e-32
Identities = 181/244 (74%), Gaps = 13/244 (5%)
Strand=Plus/Minus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
||||||| ||||||||||| ||||| | ||||||||| | ||| ||| ||| | ||
Sbjct 109100 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTGACCA-CTTAGCAGAGTCC 109042
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
|||||||||| |||||||||||| ||| || | | ||| | | | |||| |
Sbjct 109041 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 108984
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || | ||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 108983 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 108933
Query 186 TAACCACAGTTCACCCGA-ACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTAC 244
| || |||| | ||| |||| |||||| |||||| || |||||||||||||||
Sbjct 108932 TCGACATGGTTCTCTCGACGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGG 108873
Query 245 GGTA 248
||||
Sbjct 108872 GGTA 108869
>seq208
Length=245570
Score = 145 bits (160), Expect = 1e-32
Identities = 181/244 (74%), Gaps = 13/244 (5%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
||||||| ||||||||||| ||||| | ||||||||| | ||| ||| ||| | ||
Sbjct 201382 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTGACCA-CTTAGCAGAGTCC 201440
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
|||||||||| |||||||||||| ||| || | | ||| | | | |||| |
Sbjct 201441 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 201498
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || | ||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 201499 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 201549
Query 186 TAACCACAGTTCACCCGA-ACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTAC 244
| || |||| | ||| |||| |||||| |||||| || |||||||||||||||
Sbjct 201550 TCGACATGGTTCTCTCGACGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGG 201609
Query 245 GGTA 248
||||
Sbjct 201610 GGTA 201613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694393972608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |