Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31]
896 sequences; 295,462,401 total letters
Query= AAMG01000567.1
Length=197
Score E
Sequences producing significant alignments: (Bits) Value
seq321 75.2 1e-11
seq208 75.2 1e-11
>seq321
Length=132638
Score = 75.2 bits (82), Expect = 1e-11
Identities = 78/101 (77%), Gaps = 1/101 (1%)
Strand=Plus/Plus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTT-GAGTGAATCACGGTTAA 82
||||| |||||| || | || || ||||||| ||||| | ||| ||| || | ||
Sbjct 108874 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCGTCGAGAGAACCATGTCGAA 108933
Query 83 GGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123
|||||| |||||| |||||| |||||||||||| || ||||
Sbjct 108934 GGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 108974
>seq208
Length=245570
Score = 75.2 bits (82), Expect = 1e-11
Identities = 78/101 (77%), Gaps = 1/101 (1%)
Strand=Plus/Minus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTT-GAGTGAATCACGGTTAA 82
||||| |||||| || | || || ||||||| ||||| | ||| ||| || | ||
Sbjct 201608 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCGTCGAGAGAACCATGTCGAA 201549
Query 83 GGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123
|||||| |||||| |||||| |||||||||||| || ||||
Sbjct 201548 GGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 201508
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531195389184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |