Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq321 233 5e-59 seq208 233 5e-59 >seq321 Length=132638 Score = 233 bits (258), Expect = 5e-59 Identities = 299/413 (72%), Gaps = 22/413 (5%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||| | |||||||||| | || ||||||||||| | ||| | |||||||||| || Sbjct 109286 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 109227 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 109226 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 109167 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186 | |||| ||||| ||||||||||||||||||||| || | ||| ||| | || Sbjct 109166 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGC------TTATCACAC 109113 Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 246 | | ||||||| |||||||||||| |||| || |||||| || | | | Sbjct 109112 TTCTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTGACCACT 109053 Query 247 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATG 306 | ||||||| ||||||||||||||||||||||| | |||||||| | | | | | Sbjct 109052 TAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTA 108993 Query 307 AGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCT 366 | | | || || |||| ||||||||||||||||||| | | Sbjct 108992 ATCAAA---AGATAGGAGAGCACC------------CCTTCTCCCGAAGTTACGGGGTCA 108948 Query 367 TTTTGCCTAGTTCCTTCCCCCGAGTTCTCTC-AAGCGCCTTGGTATTCTCTAC 418 ||||||| ||||||||| | |||||||| | ||||| | |||| |||||| Sbjct 108947 TTTTGCCGAGTTCCTTCGACATGGTTCTCTCGACGCGCCCTAGTATACTCTAC 108895 >seq208 Length=245570 Score = 233 bits (258), Expect = 5e-59 Identities = 299/413 (72%), Gaps = 22/413 (5%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||| | |||||||||| | || ||||||||||| | ||| | |||||||||| || Sbjct 201196 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 201255 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 201256 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 201315 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186 | |||| ||||| ||||||||||||||||||||| || | ||| ||| | || Sbjct 201316 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGC------TTATCACAC 201369 Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 246 | | ||||||| |||||||||||| |||| || |||||| || | | | Sbjct 201370 TTCTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTGACCACT 201429 Query 247 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATG 306 | ||||||| ||||||||||||||||||||||| | |||||||| | | | | | Sbjct 201430 TAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTA 201489 Query 307 AGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCT 366 | | | || || |||| ||||||||||||||||||| | | Sbjct 201490 ATCAAA---AGATAGGAGAGCACC------------CCTTCTCCCGAAGTTACGGGGTCA 201534 Query 367 TTTTGCCTAGTTCCTTCCCCCGAGTTCTCTC-AAGCGCCTTGGTATTCTCTAC 418 ||||||| ||||||||| | |||||||| | ||||| | |||| |||||| Sbjct 201535 TTTTGCCGAGTTCCTTCGACATGGTTCTCTCGACGCGCCCTAGTATACTCTAC 201587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260788703232