Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq81 417 1e-114 seq58 417 1e-114 seq10 208 1e-51 seq88 145 1e-32 seq155 141 2e-31 seq143 141 2e-31 seq171 140 6e-31 seq328 134 2e-29 seq25 134 2e-29 seq560 132 8e-29 seq306 127 3e-27 seq12 125 1e-26 seq217 123 4e-26 seq86 89.7 9e-16 seq148 73.4 7e-11 seq138 73.4 7e-11 >seq81 Length=1043490 Score = 417 bits (462), Expect = 1e-114 Identities = 269/293 (92%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| || | ||| |||||||||||||||||||||||||||||||||| Sbjct 1035063 TACTAGGTTGAATTACTATCGCGGC-ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 1035121 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 1035122 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 1035181 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1035182 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 1035241 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 1035242 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 1035301 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 1035302 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 1035354 Score = 365 bits (404), Expect = 8e-99 Identities = 258/287 (90%), Gaps = 6/287 (2%) Strand=Plus/Plus Query 11 AATTACC-ATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 ||||| | || | ||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct 1026275 AATTAACTATCGCGGC-ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 1026333 Query 70 AAACC-CAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG-AATTCTGC 127 ||||| |||||||||||||||||| |||||||||||||||||| ||| | |||||||| Sbjct 1026334 AAACCTCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGGAATTCTGC 1026393 Query 128 TTCGGTATGAT-AGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGC 186 ||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1026394 TTCACAATGATTAGGAAAGGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGC 1026453 Query 187 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 246 | ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 1026454 T-GGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATT 1026512 Query 247 TCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 ||| || ||||||||||||||||| || |||||| |||| |||||| Sbjct 1026513 CCGAAGGTCTAAAGGATCGATAGGCAACGCTTTCACGGTTCGTATTC 1026559 >seq58 Length=1363798 Score = 417 bits (462), Expect = 1e-114 Identities = 269/293 (92%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| || | ||| |||||||||||||||||||||||||||||||||| Sbjct 1341022 TACTAGGTTGAATTACTATCGCGGC-ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 1340964 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 1340963 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 1340904 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1340903 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 1340844 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 1340843 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 1340784 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 1340783 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 1340731 >seq10 Length=3646474 Score = 208 bits (230), Expect = 1e-51 Identities = 132/142 (93%), Gaps = 1/142 (1%) Strand=Plus/Minus Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3334167 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 3334108 Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272 ||||||||||||||| |||||||||| ||||||| ||| || |||||||||||||||||| Sbjct 3334107 GTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCGAAGGTCTAAAGGATCGATAGGCC 3334048 Query 273 ACACTTTCATG-GTTTGTATTC 293 || |||| | | ||| |||||| Sbjct 3334047 ACGCTTTTACGCGTTCGTATTC 3334026 >seq88 Length=964580 Score = 145 bits (160), Expect = 1e-32 Identities = 138/175 (79%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 ||||||| |||| ||||||||| |||| ||| ||| ||||||||||||||||||| Sbjct 533929 GAATTCTACTTCACAATGATAGGACGAGCAAGCATTGAATAATCAAAAAGCAACGTCGCT 533988 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||| |||||||||||||||||||||| |||||||| ||||||| ||| |||| | Sbjct 533989 CTGAACA-TTGGCTGCCACAAGCCAGTTATTTTTGTGGTAATTTTTCTGACACGTCTAAC 534047 Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | |||| | | | ||||| |||||||||| ||| |||| | || |||||| Sbjct 534048 TTTAAATACCAAAAGTCTAAAAGATCGATAGGTCACGCTTTTACCATTCGTATTC 534102 >seq155 Length=424263 Score = 141 bits (156), Expect = 2e-31 Identities = 90/98 (92%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 195 CACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA 254 ||||||||||||||||||||||||||||||| | |||||||||| ||||||| ||| || Sbjct 326199 CACAAGCCAGTTATCCCTGTGGTAACTTTTCAGACACCTCTAGCTTCAAATTCCGAAGGT 326258 Query 255 CTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 ||||||||||||||||||||||||||| |||| ||||| Sbjct 326259 CTAAAGGATCGATAGGCCACACTTTCACGGTTCGTATT 326296 Score = 141 bits (156), Expect = 2e-31 Identities = 90/98 (92%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 195 CACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA 254 ||||||||||||||||||||||||||||||| | |||||||||| ||||||| ||| || Sbjct 398635 CACAAGCCAGTTATCCCTGTGGTAACTTTTCAGACACCTCTAGCTTCAAATTCCGAAGGT 398694 Query 255 CTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 ||||||||||||||||| |||||||||||||| ||||| Sbjct 398695 CTAAAGGATCGATAGGCTACACTTTCATGGTTCGTATT 398732 >seq143 Length=574977 Score = 141 bits (156), Expect = 2e-31 Identities = 90/98 (92%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 195 CACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA 254 ||||||||||||||||||||||||||||||| | |||||||||| ||||||| ||| || Sbjct 258400 CACAAGCCAGTTATCCCTGTGGTAACTTTTCAGACACCTCTAGCTTCAAATTCCGAAGGT 258459 Query 255 CTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 ||||||||||||||||||||||||||| |||| ||||| Sbjct 258460 CTAAAGGATCGATAGGCCACACTTTCACGGTTCGTATT 258497 >seq171 Length=389842 Score = 140 bits (154), Expect = 6e-31 Identities = 92/102 (90%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250 || ||||| |||||||||||||||||||||||||| | |||||||||| ||||||| ||| Sbjct 72473 CTACCACATGCCAGTTATCCCTGTGGTAACTTTTCAGACACCTCTAGCTTCAAATTCCGA 72532 Query 251 GGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 || ||||||||||||||||||||||||||| |||| ||||| Sbjct 72533 AGGTCTAAAGGATCGATAGGCCACACTTTCACGGTTCGTATT 72574 >seq328 Length=89682 Score = 134 bits (148), Expect = 2e-29 Identities = 91/102 (89%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250 || |||||||||||||||||||||||||||||||| | |||||||||| ||||||||||| Sbjct 66675 CTACCACAAGCCAGTTATCCCTGTGGTAACTTTTCAGACACCTCTAGCTTCAAATTTCGA 66616 Query 251 GGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 || |||| |||||||||||||| |||||| |||| ||||| Sbjct 66615 AGGTATAAAAGATCGATAGGCCACGCTTTCACGGTTCGTATT 66574 >seq25 Length=2460884 Score = 134 bits (148), Expect = 2e-29 Identities = 91/102 (89%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250 || |||||||||||||||||||||||||||||||| | |||||||||| ||||| | ||| Sbjct 8841 CTACCACAAGCCAGTTATCCCTGTGGTAACTTTTCAGACACCTCTAGCTTCAAAATCCGA 8782 Query 251 GGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 || |||||||||||||||||||||||||| |||| ||||| Sbjct 8781 AGGTGTAAAGGATCGATAGGCCACACTTTCACGGTTCGTATT 8740 >seq560 Length=121721 Score = 132 bits (146), Expect = 8e-29 Identities = 88/98 (90%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 195 CACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA 254 |||||||||||| |||||||||||||||||| | |||||||||| ||||||| ||| || Sbjct 6991 CACAAGCCAGTTGTCCCTGTGGTAACTTTTCAGACACCTCTAGCTTCAAATTCCGAAGGT 7050 Query 255 CTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 |||||| |||||||||||||||||||| |||| ||||| Sbjct 7051 CTAAAGTATCGATAGGCCACACTTTCACGGTTCGTATT 7088 Score = 125 bits (138), Expect = 1e-26 Identities = 89/102 (87%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250 || |||||||| |||||||||| |||||||||||| |||||||||| | ||||| ||| Sbjct 17866 CTACCACAAGCTAGTTATCCCTATGGTAACTTTTCAAACACCTCTAGCTTTAAATTCCGA 17925 Query 251 GGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 || ||||||||||||||||||||||||||| |||| ||||| Sbjct 17926 AGGTCTAAAGGATCGATAGGCCACACTTTCACGGTTCGTATT 17967 >seq306 Length=91269 Score = 127 bits (140), Expect = 3e-27 Identities = 98/115 (85%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| | | ||| |||||||| ||||||||||||||||| |||||| Sbjct 6814 TACTAGGTTGAATTACTTTCGTGGC-ACGGTCATAAGTAGGGTAAAACTAACTGGTCTCA 6756 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTT 115 || ||||||||||||||||||||||| |||| || ||||||||||||||| ||| Sbjct 6755 CGATGGTCTAAACCCAGCTCACGTTCCATATTGGTCGGTGAACAATCCAACACTT 6701 >seq12 Length=3822408 Score = 125 bits (138), Expect = 1e-26 Identities = 89/102 (87%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250 || ||| |||||||||||||||||||||||||| | | |||||||||| |||||| || Sbjct 671007 CTACCAAAAGCCAGTTATCCCTGTGGTAACTTTGCAGACACCTCTAGCTACAAATTCAGA 671066 Query 251 GGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 || ||||||||||||||||||||||||||| |||| ||||| Sbjct 671067 AGGTCTAAAGGATCGATAGGCCACACTTTCACGGTTCGTATT 671108 Score = 116 bits (128), Expect = 6e-24 Identities = 87/102 (85%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250 || ||| ||||||||||||||||||||||||| | | |||||||||| |||||| || Sbjct 671838 CTACCAAAAGCCAGTTATCCCTGTGGTAACTTGGCAGACACCTCTAGCTACAAATTCAGA 671897 Query 251 GGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 || ||||||||||||||||||||||||||| |||| | ||| Sbjct 671898 AGGTCTAAAGGATCGATAGGCCACACTTTCACGGTTCGCATT 671939 >seq217 Length=193898 Score = 123 bits (136), Expect = 4e-26 Identities = 80/88 (91%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250 || |||||||||||||||||||||||||||||||| | |||||||||| ||||||||||| Sbjct 166054 CTACCACAAGCCAGTTATCCCTGTGGTAACTTTTCAGACACCTCTAGCTTCAAATTTCGA 166113 Query 251 GGGACTAAAGGATCGATAGGCCACACTT 278 || ||||| |||||||||||||| ||| Sbjct 166114 AGGTCTAAAAGATCGATAGGCCACGCTT 166141 >seq86 Length=1003153 Score = 89.7 bits (98), Expect = 9e-16 Identities = 87/103 (84%), Gaps = 7/103 (7%) Strand=Plus/Plus Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250 || ||||| ||||||||||||||||||||| |||| | |||||| || |||||| | ||| Sbjct 987368 CTACCACATGCCAGTTATCCCTGTGGTAAC-TTTCAGACACCTC-AG-CTCAAA-TCCGA 987423 Query 251 GGGACTAAAGGATCGATAGGCCACAC-TTTCATGGTTTGTATT 292 || |||||||||||| ||||| ||| ||||| |||| ||||| Sbjct 987424 AGGTCTAAAGGATCGA-AGGCC-CACTTTTCACGGTTCGTATT 987464 >seq148 Length=601803 Score = 73.4 bits (80), Expect = 7e-11 Identities = 45/48 (94%), Gaps = 0/48 (0%) Strand=Plus/Minus Query 160 ATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207 |||||||||||| || ||||||||||| |||||||||||||||||||| Sbjct 446110 ATCAAAAAGCAATGTGGCTATGAACGCATGGCTGCCACAAGCCAGTTA 446063 >seq138 Length=513091 Score = 73.4 bits (80), Expect = 7e-11 Identities = 45/48 (94%), Gaps = 0/48 (0%) Strand=Plus/Plus Query 160 ATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207 |||||||||||| || ||||||||||| |||||||||||||||||||| Sbjct 512922 ATCAAAAAGCAATGTGGCTATGAACGCATGGCTGCCACAAGCCAGTTA 512969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854392344576