Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31]
896 sequences; 295,462,401 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq81 417 1e-114
seq58 417 1e-114
seq10 208 1e-51
seq88 145 1e-32
seq155 141 2e-31
seq143 141 2e-31
seq171 140 6e-31
seq328 134 2e-29
seq25 134 2e-29
seq560 132 8e-29
seq306 127 3e-27
seq12 125 1e-26
seq217 123 4e-26
seq86 89.7 9e-16
seq148 73.4 7e-11
seq138 73.4 7e-11
>seq81
Length=1043490
Score = 417 bits (462), Expect = 1e-114
Identities = 269/293 (92%), Gaps = 1/293 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| || | ||| ||||||||||||||||||||||||||||||||||
Sbjct 1035063 TACTAGGTTGAATTACTATCGCGGC-ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 1035121
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 1035122 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 1035181
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035182 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 1035241
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 1035242 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 1035301
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| ||| || |||||||||||||||||||| |||||| |||| ||||||
Sbjct 1035302 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 1035354
Score = 365 bits (404), Expect = 8e-99
Identities = 258/287 (90%), Gaps = 6/287 (2%)
Strand=Plus/Plus
Query 11 AATTACC-ATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
||||| | || | ||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1026275 AATTAACTATCGCGGC-ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 1026333
Query 70 AAACC-CAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG-AATTCTGC 127
||||| |||||||||||||||||| |||||||||||||||||| ||| | ||||||||
Sbjct 1026334 AAACCTCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGGAATTCTGC 1026393
Query 128 TTCGGTATGAT-AGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGC 186
||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1026394 TTCACAATGATTAGGAAAGGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGC 1026453
Query 187 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 246
| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct 1026454 T-GGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATT 1026512
Query 247 TCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
||| || ||||||||||||||||| || |||||| |||| ||||||
Sbjct 1026513 CCGAAGGTCTAAAGGATCGATAGGCAACGCTTTCACGGTTCGTATTC 1026559
>seq58
Length=1363798
Score = 417 bits (462), Expect = 1e-114
Identities = 269/293 (92%), Gaps = 1/293 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| || | ||| ||||||||||||||||||||||||||||||||||
Sbjct 1341022 TACTAGGTTGAATTACTATCGCGGC-ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 1340964
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 1340963 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 1340904
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1340903 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 1340844
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 1340843 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 1340784
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| ||| || |||||||||||||||||||| |||||| |||| ||||||
Sbjct 1340783 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 1340731
>seq10
Length=3646474
Score = 208 bits (230), Expect = 1e-51
Identities = 132/142 (93%), Gaps = 1/142 (1%)
Strand=Plus/Minus
Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3334167 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 3334108
Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272
||||||||||||||| |||||||||| ||||||| ||| || ||||||||||||||||||
Sbjct 3334107 GTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCGAAGGTCTAAAGGATCGATAGGCC 3334048
Query 273 ACACTTTCATG-GTTTGTATTC 293
|| |||| | | ||| ||||||
Sbjct 3334047 ACGCTTTTACGCGTTCGTATTC 3334026
>seq88
Length=964580
Score = 145 bits (160), Expect = 1e-32
Identities = 138/175 (79%), Gaps = 1/175 (1%)
Strand=Plus/Plus
Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178
||||||| |||| ||||||||| |||| ||| ||| |||||||||||||||||||
Sbjct 533929 GAATTCTACTTCACAATGATAGGACGAGCAAGCATTGAATAATCAAAAAGCAACGTCGCT 533988
Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238
||||| |||||||||||||||||||||| |||||||| ||||||| ||| |||| |
Sbjct 533989 CTGAACA-TTGGCTGCCACAAGCCAGTTATTTTTGTGGTAATTTTTCTGACACGTCTAAC 534047
Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| |||| | | | ||||| |||||||||| ||| |||| | || ||||||
Sbjct 534048 TTTAAATACCAAAAGTCTAAAAGATCGATAGGTCACGCTTTTACCATTCGTATTC 534102
>seq155
Length=424263
Score = 141 bits (156), Expect = 2e-31
Identities = 90/98 (92%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 195 CACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA 254
||||||||||||||||||||||||||||||| | |||||||||| ||||||| ||| ||
Sbjct 326199 CACAAGCCAGTTATCCCTGTGGTAACTTTTCAGACACCTCTAGCTTCAAATTCCGAAGGT 326258
Query 255 CTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292
||||||||||||||||||||||||||| |||| |||||
Sbjct 326259 CTAAAGGATCGATAGGCCACACTTTCACGGTTCGTATT 326296
Score = 141 bits (156), Expect = 2e-31
Identities = 90/98 (92%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 195 CACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA 254
||||||||||||||||||||||||||||||| | |||||||||| ||||||| ||| ||
Sbjct 398635 CACAAGCCAGTTATCCCTGTGGTAACTTTTCAGACACCTCTAGCTTCAAATTCCGAAGGT 398694
Query 255 CTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292
||||||||||||||||| |||||||||||||| |||||
Sbjct 398695 CTAAAGGATCGATAGGCTACACTTTCATGGTTCGTATT 398732
>seq143
Length=574977
Score = 141 bits (156), Expect = 2e-31
Identities = 90/98 (92%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 195 CACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA 254
||||||||||||||||||||||||||||||| | |||||||||| ||||||| ||| ||
Sbjct 258400 CACAAGCCAGTTATCCCTGTGGTAACTTTTCAGACACCTCTAGCTTCAAATTCCGAAGGT 258459
Query 255 CTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292
||||||||||||||||||||||||||| |||| |||||
Sbjct 258460 CTAAAGGATCGATAGGCCACACTTTCACGGTTCGTATT 258497
>seq171
Length=389842
Score = 140 bits (154), Expect = 6e-31
Identities = 92/102 (90%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250
|| ||||| |||||||||||||||||||||||||| | |||||||||| ||||||| |||
Sbjct 72473 CTACCACATGCCAGTTATCCCTGTGGTAACTTTTCAGACACCTCTAGCTTCAAATTCCGA 72532
Query 251 GGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292
|| ||||||||||||||||||||||||||| |||| |||||
Sbjct 72533 AGGTCTAAAGGATCGATAGGCCACACTTTCACGGTTCGTATT 72574
>seq328
Length=89682
Score = 134 bits (148), Expect = 2e-29
Identities = 91/102 (89%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250
|| |||||||||||||||||||||||||||||||| | |||||||||| |||||||||||
Sbjct 66675 CTACCACAAGCCAGTTATCCCTGTGGTAACTTTTCAGACACCTCTAGCTTCAAATTTCGA 66616
Query 251 GGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292
|| |||| |||||||||||||| |||||| |||| |||||
Sbjct 66615 AGGTATAAAAGATCGATAGGCCACGCTTTCACGGTTCGTATT 66574
>seq25
Length=2460884
Score = 134 bits (148), Expect = 2e-29
Identities = 91/102 (89%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250
|| |||||||||||||||||||||||||||||||| | |||||||||| ||||| | |||
Sbjct 8841 CTACCACAAGCCAGTTATCCCTGTGGTAACTTTTCAGACACCTCTAGCTTCAAAATCCGA 8782
Query 251 GGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292
|| |||||||||||||||||||||||||| |||| |||||
Sbjct 8781 AGGTGTAAAGGATCGATAGGCCACACTTTCACGGTTCGTATT 8740
>seq560
Length=121721
Score = 132 bits (146), Expect = 8e-29
Identities = 88/98 (90%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 195 CACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA 254
|||||||||||| |||||||||||||||||| | |||||||||| ||||||| ||| ||
Sbjct 6991 CACAAGCCAGTTGTCCCTGTGGTAACTTTTCAGACACCTCTAGCTTCAAATTCCGAAGGT 7050
Query 255 CTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292
|||||| |||||||||||||||||||| |||| |||||
Sbjct 7051 CTAAAGTATCGATAGGCCACACTTTCACGGTTCGTATT 7088
Score = 125 bits (138), Expect = 1e-26
Identities = 89/102 (87%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250
|| |||||||| |||||||||| |||||||||||| |||||||||| | ||||| |||
Sbjct 17866 CTACCACAAGCTAGTTATCCCTATGGTAACTTTTCAAACACCTCTAGCTTTAAATTCCGA 17925
Query 251 GGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292
|| ||||||||||||||||||||||||||| |||| |||||
Sbjct 17926 AGGTCTAAAGGATCGATAGGCCACACTTTCACGGTTCGTATT 17967
>seq306
Length=91269
Score = 127 bits (140), Expect = 3e-27
Identities = 98/115 (85%), Gaps = 1/115 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| | | ||| |||||||| ||||||||||||||||| ||||||
Sbjct 6814 TACTAGGTTGAATTACTTTCGTGGC-ACGGTCATAAGTAGGGTAAAACTAACTGGTCTCA 6756
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTT 115
|| ||||||||||||||||||||||| |||| || ||||||||||||||| |||
Sbjct 6755 CGATGGTCTAAACCCAGCTCACGTTCCATATTGGTCGGTGAACAATCCAACACTT 6701
>seq12
Length=3822408
Score = 125 bits (138), Expect = 1e-26
Identities = 89/102 (87%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250
|| ||| |||||||||||||||||||||||||| | | |||||||||| |||||| ||
Sbjct 671007 CTACCAAAAGCCAGTTATCCCTGTGGTAACTTTGCAGACACCTCTAGCTACAAATTCAGA 671066
Query 251 GGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292
|| ||||||||||||||||||||||||||| |||| |||||
Sbjct 671067 AGGTCTAAAGGATCGATAGGCCACACTTTCACGGTTCGTATT 671108
Score = 116 bits (128), Expect = 6e-24
Identities = 87/102 (85%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250
|| ||| ||||||||||||||||||||||||| | | |||||||||| |||||| ||
Sbjct 671838 CTACCAAAAGCCAGTTATCCCTGTGGTAACTTGGCAGACACCTCTAGCTACAAATTCAGA 671897
Query 251 GGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292
|| ||||||||||||||||||||||||||| |||| | |||
Sbjct 671898 AGGTCTAAAGGATCGATAGGCCACACTTTCACGGTTCGCATT 671939
>seq217
Length=193898
Score = 123 bits (136), Expect = 4e-26
Identities = 80/88 (91%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250
|| |||||||||||||||||||||||||||||||| | |||||||||| |||||||||||
Sbjct 166054 CTACCACAAGCCAGTTATCCCTGTGGTAACTTTTCAGACACCTCTAGCTTCAAATTTCGA 166113
Query 251 GGGACTAAAGGATCGATAGGCCACACTT 278
|| ||||| |||||||||||||| |||
Sbjct 166114 AGGTCTAAAAGATCGATAGGCCACGCTT 166141
>seq86
Length=1003153
Score = 89.7 bits (98), Expect = 9e-16
Identities = 87/103 (84%), Gaps = 7/103 (7%)
Strand=Plus/Plus
Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250
|| ||||| ||||||||||||||||||||| |||| | |||||| || |||||| | |||
Sbjct 987368 CTACCACATGCCAGTTATCCCTGTGGTAAC-TTTCAGACACCTC-AG-CTCAAA-TCCGA 987423
Query 251 GGGACTAAAGGATCGATAGGCCACAC-TTTCATGGTTTGTATT 292
|| |||||||||||| ||||| ||| ||||| |||| |||||
Sbjct 987424 AGGTCTAAAGGATCGA-AGGCC-CACTTTTCACGGTTCGTATT 987464
>seq148
Length=601803
Score = 73.4 bits (80), Expect = 7e-11
Identities = 45/48 (94%), Gaps = 0/48 (0%)
Strand=Plus/Minus
Query 160 ATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207
|||||||||||| || ||||||||||| ||||||||||||||||||||
Sbjct 446110 ATCAAAAAGCAATGTGGCTATGAACGCATGGCTGCCACAAGCCAGTTA 446063
>seq138
Length=513091
Score = 73.4 bits (80), Expect = 7e-11
Identities = 45/48 (94%), Gaps = 0/48 (0%)
Strand=Plus/Plus
Query 160 ATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207
|||||||||||| || ||||||||||| ||||||||||||||||||||
Sbjct 512922 ATCAAAAAGCAATGTGGCTATGAACGCATGGCTGCCACAAGCCAGTTA 512969
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854392344576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |