Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31]
896 sequences; 295,462,401 total letters
Query= AAMG01001432.1
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
seq144 215 1e-53
seq208 136 8e-30
>seq144
Length=473486
Score = 215 bits (238), Expect = 1e-53
Identities = 232/305 (76%), Gaps = 18/305 (6%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| | ||||| |||| ||||||| | || || |||||||||||||||||||||
Sbjct 55162 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 55221
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| |||
Sbjct 55222 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 55281
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180
| ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || |
Sbjct 55282 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 55341
Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239
|| ||| || || | | ||||| | | || | |||||||||
Sbjct 55342 GCGGATTCCTCCTT--TTA------------CTCCTCAGCC--TACGGGGTATTAGCAAC 55385
Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299
|||||||| ||| |||| ||| || |||||||| || ||| ||||||||||||||||
Sbjct 55386 CGTTTCCAGTTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCG 55444
Query 300 CCACT 304
|||||
Sbjct 55445 CCACT 55449
>seq208
Length=245570
Score = 136 bits (150), Expect = 8e-30
Identities = 122/153 (80%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
|||| ||| || |||| |||||||| ||| || ||||||||||||| ||||| ||||||
Sbjct 115373 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCC 115432
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
||||||||||||||||||| |||||| | ||| || || || |||| ||| | ||
Sbjct 115433 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 115492
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAAT 159
|||||| || ||| || ||||||||||||||
Sbjct 115493 CTTGGTCAGCCTTTACCTGACCAACTACCTAAT 115525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 998391054336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |