Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31]
896 sequences; 295,462,401 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq81 131 2e-28
seq58 131 2e-28
seq10 131 2e-28
>seq81
Length=1043490
Score = 131 bits (144), Expect = 2e-28
Identities = 138/178 (78%), Gaps = 3/178 (2%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||||
Sbjct 1022268 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGG 1022209
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | |||| ||||| ||| || | ||| || |||||||| |
Sbjct 1022208 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 1022151
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| | ||| ||||||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 1022150 ACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 1022093
Score = 131 bits (144), Expect = 2e-28
Identities = 138/178 (78%), Gaps = 3/178 (2%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||||
Sbjct 1039863 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGG 1039804
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | |||| ||||| ||| || | ||| || |||||||| |
Sbjct 1039803 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 1039746
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| | ||| ||||||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 1039745 ACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 1039688
Score = 127 bits (140), Expect = 2e-27
Identities = 138/178 (78%), Gaps = 4/178 (2%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||||
Sbjct 1031062 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGG 1031003
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | |||| ||||| ||| || | ||| || |||||||| |
Sbjct 1031002 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 1030945
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| | ||| ||||||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 1030944 ACA-GGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 1030888
>seq58
Length=1363798
Score = 131 bits (144), Expect = 2e-28
Identities = 138/178 (78%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||||
Sbjct 1336226 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGG 1336285
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | |||| ||||| ||| || | ||| || |||||||| |
Sbjct 1336286 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 1336343
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| | ||| ||||||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 1336344 ACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 1336401
>seq10
Length=3646474
Score = 131 bits (144), Expect = 2e-28
Identities = 138/178 (78%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||||
Sbjct 3329521 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGG 3329580
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | |||| ||||| ||| || | ||| || |||||||| |
Sbjct 3329581 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 3329638
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| | ||| ||||||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 3329639 ACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 3329696
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511995555840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |