Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq81 306 7e-81 seq58 306 7e-81 seq10 306 7e-81 >seq81 Length=1043490 Score = 306 bits (338), Expect = 7e-81 Identities = 258/316 (82%), Gaps = 11/316 (3%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCA------GGCCCGCTTTGGCGGGTCGCCGGCT 73 || |||||||| | |||||||| |||| | ||| | | |||| || ||| Sbjct 1039284 GAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGCATCCCTCCGCGG----CCAGCT 1039229 Query 74 TCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132 ||||||||||||||| | | | || | | |||||||||||||||||||||||||||||| Sbjct 1039228 TCTTAGAGGGACTATGGTCGTTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGAT 1039169 Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192 |||||||||||||||||||||||||||||||||||||| | |||||||| | | || Sbjct 1039168 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTCTACCGCC 1039109 Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252 ||||||| ||| | |||||||||| ||| | ||||| |||||||||| ||||||| Sbjct 1039108 TTGGCCGACAGGCCCGGGTAATCTTCGAAAATTTCATCGTGATGGGGATAGATCATTGCA 1039049 Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312 ||| ||| ||||||||||||||| ||||||||||||| ||||||||| |||||||| ||| Sbjct 1039048 ATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTAC 1038989 Query 313 GTCCCTGCCCTTTGTA 328 |||||||||||||||| Sbjct 1038988 GTCCCTGCCCTTTGTA 1038973 Score = 298 bits (330), Expect = 1e-78 Identities = 258/317 (81%), Gaps = 12/317 (4%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCA------GGCCCGCTTTGGCGGGTCGCCGGCT 73 || |||||||| | |||||||| |||| | ||| | | |||| || ||| Sbjct 1030485 GAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGCATCCCTCCGCGG----CCAGCT 1030430 Query 74 TCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132 ||||||||||||||| | | | || | | |||||||||||||||||||||||||||||| Sbjct 1030429 TCTTAGAGGGACTATGGTCGTTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGAT 1030370 Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192 |||||||||||||||||||||||||||||||||||||| | |||||||| | | || Sbjct 1030369 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTCTACCGCC 1030310 Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252 ||||||| ||| | |||||||||| ||| | ||||| |||||||||| ||||||| Sbjct 1030309 TTGGCCGACAGGCCCGGGTAATCTTCGAAAATTTCATCGTGATGGGGATAGATCATTGCA 1030250 Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAA-GCGCGTGTCATCAGCACGCGTTGATTA 311 ||| ||| ||||||||||||||| |||||||| ||||| ||||||||| |||||||| || Sbjct 1030249 ATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGGCGCGAGTCATCAGCTCGCGTTGACTA 1030190 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 1030189 CGTCCCTGCCCTTTGTA 1030173 Score = 289 bits (320), Expect = 5e-76 Identities = 219/257 (85%), Gaps = 1/257 (0%) Strand=Plus/Minus Query 73 TTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 || |||| |||||||| | | | || | | ||||||||||||||||||||||||||||| Sbjct 1021634 TTTTTAGGGGGACTATGGTCGTTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGA 1021575 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||||||||||||||||||||||||||||| | |||||||| | | | Sbjct 1021574 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTCTACCGC 1021515 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||||||| ||| | |||||||||| ||| | ||||| |||||||||| |||||| Sbjct 1021514 CTTGGCCGACAGGCCCGGGTAATCTTCGAAAATTTCATCGTGATGGGGATAGATCATTGC 1021455 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 |||| ||| ||||||||||||||| ||||||||||||| ||||||||| |||||||| || Sbjct 1021454 AATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTA 1021395 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 1021394 CGTCCCTGCCCTTTGTA 1021378 >seq58 Length=1363798 Score = 306 bits (338), Expect = 7e-81 Identities = 258/316 (82%), Gaps = 11/316 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCA------GGCCCGCTTTGGCGGGTCGCCGGCT 73 || |||||||| | |||||||| |||| | ||| | | |||| || ||| Sbjct 1336805 GAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGCATCCCTCCGCGG----CCAGCT 1336860 Query 74 TCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132 ||||||||||||||| | | | || | | |||||||||||||||||||||||||||||| Sbjct 1336861 TCTTAGAGGGACTATGGTCGTTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGAT 1336920 Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192 |||||||||||||||||||||||||||||||||||||| | |||||||| | | || Sbjct 1336921 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTCTACCGCC 1336980 Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252 ||||||| ||| | |||||||||| ||| | ||||| |||||||||| ||||||| Sbjct 1336981 TTGGCCGACAGGCCCGGGTAATCTTCGAAAATTTCATCGTGATGGGGATAGATCATTGCA 1337040 Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312 ||| ||| ||||||||||||||| ||||||||||||| ||||||||| |||||||| ||| Sbjct 1337041 ATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTAC 1337100 Query 313 GTCCCTGCCCTTTGTA 328 |||||||||||||||| Sbjct 1337101 GTCCCTGCCCTTTGTA 1337116 >seq10 Length=3646474 Score = 306 bits (338), Expect = 7e-81 Identities = 258/316 (82%), Gaps = 11/316 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCA------GGCCCGCTTTGGCGGGTCGCCGGCT 73 || |||||||| | |||||||| |||| | ||| | | |||| || ||| Sbjct 3330100 GAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGCATCCCTCCGCGG----CCAGCT 3330155 Query 74 TCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132 ||||||||||||||| | | | || | | |||||||||||||||||||||||||||||| Sbjct 3330156 TCTTAGAGGGACTATGGTCGTTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGAT 3330215 Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192 |||||||||||||||||||||||||||||||||||||| | |||||||| | | || Sbjct 3330216 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTCTACCGCC 3330275 Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252 ||||||| ||| | |||||||||| ||| | ||||| |||||||||| ||||||| Sbjct 3330276 TTGGCCGACAGGCCCGGGTAATCTTCGAAAATTTCATCGTGATGGGGATAGATCATTGCA 3330335 Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312 ||| ||| ||||||||||||||| ||||||||||||| ||||||||| |||||||| ||| Sbjct 3330336 ATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTAC 3330395 Query 313 GTCCCTGCCCTTTGTA 328 |||||||||||||||| Sbjct 3330396 GTCCCTGCCCTTTGTA 3330411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947191513088