Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31]
896 sequences; 295,462,401 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq81 697 0.0
seq58 695 0.0
seq10 695 0.0
seq171 423 6e-116
seq360 394 3e-107
seq476 383 5e-104
seq328 383 5e-104
seq36 268 3e-69
seq97 196 2e-47
seq14 100 9e-19
seq321 78.8 3e-12
seq208 78.8 3e-12
>seq81
Length=1043490
Score = 697 bits (772), Expect = 0.0
Identities = 477/534 (89%), Gaps = 9/534 (2%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| || ||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 1026593 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 1026652
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1026653 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATC 1026712
Query 127 GGCCCGC----GAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAG-TTCCGCTTC 181
|||||| || || |||| ||| || || | | || || | ||||| ||
Sbjct 1026713 GGCCCGTCGGGGACGGGCCTTGGGACCAAAAGGAGGGCAG---AGCCCCGCTTCCGGCTC 1026769
Query 182 ATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCC 241
| || ||||||||| |||| ||| ||||||||||||||||| |||| | |||||||
Sbjct 1026770 ACGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCCGAG-GGCTCCC 1026828
Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1026829 ACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 1026888
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 1026889 TCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGT 1026948
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1026949 AGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 1027008
Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1027009 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 1027068
Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 1027069 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 1027122
Score = 695 bits (770), Expect = 0.0
Identities = 477/534 (89%), Gaps = 8/534 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| || ||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 1035388 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 1035447
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1035448 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATC 1035507
Query 127 GGCCCGC----GAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAG-TTCCGCTTC 181
|||||| || || |||| ||| || || || || || | ||||| ||
Sbjct 1035508 GGCCCGTCGGGGACGGGCCTTGGGACCAAAAGGAGG--GGCAGAGCCCCGCTTCCGGCTC 1035565
Query 182 ATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCC 241
| || ||||||||| |||| ||| ||||||||||||||||| |||| | |||||||
Sbjct 1035566 ACGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCCGAG-GGCTCCC 1035624
Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035625 ACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 1035684
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 1035685 TCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGT 1035744
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035745 AGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 1035804
Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035805 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 1035864
Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 1035865 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 1035918
>seq58
Length=1363798
Score = 695 bits (770), Expect = 0.0
Identities = 477/534 (89%), Gaps = 8/534 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| || ||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 1340697 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 1340638
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1340637 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATC 1340578
Query 127 GGCCCGC----GAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAG-TTCCGCTTC 181
|||||| || || |||| ||| || || || || || | ||||| ||
Sbjct 1340577 GGCCCGTCGGGGACGGGCCTTGGGACCAAAAGGAGG--GGCAGAGCCCCGCTTCCGGCTC 1340520
Query 182 ATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCC 241
| || ||||||||| |||| ||| ||||||||||||||||| |||| | |||||||
Sbjct 1340519 ACGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCCGAG-GGCTCCC 1340461
Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1340460 ACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 1340401
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 1340400 TCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGT 1340341
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1340340 AGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 1340281
Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1340280 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 1340221
Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 1340220 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 1340167
>seq10
Length=3646474
Score = 695 bits (770), Expect = 0.0
Identities = 477/534 (89%), Gaps = 8/534 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| || ||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 3333992 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 3333933
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 3333932 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATC 3333873
Query 127 GGCCCGC----GAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAG-TTCCGCTTC 181
|||||| || || |||| ||| || || || || || | ||||| ||
Sbjct 3333872 GGCCCGTCGGGGACGGGCCTTGGGACCAAAAGGAGG--GGCAGAGCCCCGCTTCCGGCTC 3333815
Query 182 ATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCC 241
| || ||||||||| |||| ||| ||||||||||||||||| |||| | |||||||
Sbjct 3333814 ACGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCCGAG-GGCTCCC 3333756
Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3333755 ACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 3333696
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 3333695 TCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGT 3333636
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3333635 AGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 3333576
Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3333575 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 3333516
Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 3333515 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 3333462
Score = 448 bits (496), Expect = 2e-123
Identities = 280/301 (93%), Gaps = 0/301 (0%)
Strand=Plus/Minus
Query 235 GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294
||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||| |||
Sbjct 21686 GGCTCCCACTTATCCTACACCTCTCAAGCCATTTCACAAAGTCGGACTGGAGTCAAACTC 21627
Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354
|| |||||||||||||||| ||||||| || |||||| || |||||||||||||||||||
Sbjct 21626 AATAGGGTCTTCTTTCCCCACTGATTCTGCTAAGCCCATTTCCTTGGCTGTGGTTTCGCT 21567
Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414
||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 21566 GGATAGTAGACAGGGACAGTTGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 21507
Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct 21506 TGACGAGGCATTTGGTTACCTTAAGAGAGTCATATTTACTCCCGCCGTTTACCCGCGCTT 21447
Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534
||||||||||||||||||||||||||| ||||||||| |||||||||||||| | |||
Sbjct 21446 GGTTGAATTTCTTCACTTTGACATTCATTACACTGGGCAAAAATCACATTGCGTTAGCAT 21387
Query 535 C 535
|
Sbjct 21386 C 21386
>seq171
Length=389842
Score = 423 bits (468), Expect = 6e-116
Identities = 266/287 (93%), Gaps = 0/287 (0%)
Strand=Plus/Plus
Query 249 CTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTT 308
||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 139485 CTACATCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAACTCAATAGGGTCTTCTT 139544
Query 309 TCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGG 368
||||| ||||||| ||| ||||| || ||||||||||||||||||| ||||||||| | |
Sbjct 139545 TCCCCACTGATTCTGCCTAGCCCATTTCCTTGGCTGTGGTTTCGCTGGATAGTAGACATG 139604
Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 139605 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 139664
Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 488
| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct 139665 GTTACCTTAAGAGAGTCATATTTACTCCCGCCGTATACCCGCGCTTGGTTGAATTTCTTC 139724
Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
||||||||||||| ||||| ||| |||||||||||||| | ||||
Sbjct 139725 ACTTTGACATTCATTACACTGTGCAAAAATCACATTGCGTTAGCATC 139771
Score = 277 bits (306), Expect = 6e-72
Identities = 174/188 (93%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 235 GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294
|||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 162933 GGCTCCGACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAACTC 162992
Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354
|| ||| |||||||||||| ||||||| ||||||| | || |||||||||||||||||||
Sbjct 162993 AATAGGATCTTCTTTCCCCACTGATTCTGCCAAGCACATTTCCTTGGCTGTGGTTTCGCT 163052
Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 163053 GGATAGTCAACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 163112
Query 415 TGACGAGG 422
||||||||
Sbjct 163113 TGACGAGG 163120
Score = 158 bits (174), Expect = 4e-36
Identities = 102/112 (91%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 235 GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294
|||||| |||||| |||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct 91984 GGCTCCGACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTGGAGTCAAACTC 92043
Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTG 346
|| |||||||||||||||| ||||||| |||||||| || |||||||||||
Sbjct 92044 AATAGGGTCTTCTTTCCCCACTGATTCTACCAAGCCCATTTCCTTGGCTGTG 92095
Score = 150 bits (166), Expect = 6e-34
Identities = 102/113 (90%), Gaps = 1/113 (1%)
Strand=Plus/Plus
Query 235 GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294
|||||| |||||| |||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct 117708 GGCTCCGACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTGGAGTCAAACTC 117767
Query 295 AACAGGGTCTTCTTT-CCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTG 346
|| |||||||||||| |||| ||||||| |||||||| || |||||||||||
Sbjct 117768 AATAGGGTCTTCTTTCCCCCACTGATTCTACCAAGCCCATTTCCTTGGCTGTG 117820
>seq360
Length=76517
Score = 394 bits (436), Expect = 3e-107
Identities = 276/305 (90%), Gaps = 7/305 (2%)
Strand=Plus/Minus
Query 235 GGCTCCCACTTATT-CTACACCTCTCA-AGTCATTTCACAAAGTCGGACTA-GAGTC-AA 290
|||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||| ||
Sbjct 15296 GGCTCCCACTTATTACTACACACCTCTTAGTCATTTCACAAAGTCGGACTAAGAGTCCAA 15237
Query 291 GCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTT 350
||||| ||||||||||||||| ||||||| || ||||| |||| |||| ||||||||
Sbjct 15236 ACTCAATAGGGTCTTCTTTCCCA-CTGATTCTGC-AAGCCATTTCC-TTGGATGTGGTTT 15180
Query 351 CGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAAT 410
|||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 15179 CGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCATCACTAAT 15120
Query 411 TAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGC 470
||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct 15119 TAGATGATGAGGCATTTGGTTACCTTAAGAGAGTCATATTTACTCCCGCCGTTTACCCGC 15060
Query 471 GCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCA 530
||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |
Sbjct 15059 GCTTGGTTGAATTTCTTCACTTTGACATTCATTACACTGGGCAAAAATCACATTGCGTTA 15000
Query 531 ACATC 535
||||
Sbjct 14999 GCATC 14995
>seq476
Length=65274
Score = 383 bits (424), Expect = 5e-104
Identities = 267/301 (89%), Gaps = 2/301 (1%)
Strand=Plus/Minus
Query 235 GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294
|||||| |||||| || ||||||||||||||||||||||||||||||||||||||| |||
Sbjct 17429 GGCTCCGACTTATCCTGCACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAACTC 17370
Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354
|| |||| ||||||||||| ||||||| ||||||||| || ||||||||||||||| |||
Sbjct 17369 AATAGGGCCTTCTTTCCCCACTGATTCTGCCAAGCCCATTTCCTTGGCTGTGGTTTGGCT 17310
Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414
||||||||| ||||||| || ||| |||||||||| |||||| || |||||||||||||
Sbjct 17309 GGATAGTAGACAGGGACATTGAGAACCTCGTTAATCTATTCATACGGGTCACTAATTAGA 17250
Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
||||||||||||||| |||||||||||||| ||| ||||| ||| || ||| ||||||||
Sbjct 17249 TGACGAGGCATTTGGTTACCTTAAGAGAGTTATATTTACT-CCGTCG-TTAACCGCGCTT 17192
Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534
|||||||||||||||| |||||||||| ||| ||| |||||||||||||||| | |||
Sbjct 17191 GGTTGAATTTCTTCACCTTGACATTCATTTCACAGGGTAGAAATCACATTGCGTTAGCAT 17132
Query 535 C 535
|
Sbjct 17131 C 17131
>seq328
Length=89682
Score = 383 bits (424), Expect = 5e-104
Identities = 267/301 (89%), Gaps = 2/301 (1%)
Strand=Plus/Minus
Query 235 GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294
|||||| |||||| || ||||||||||||||||||||||||||||||| ||||||| |||
Sbjct 79477 GGCTCCGACTTATCCTGCACCTCTCAAGTCATTTCACAAAGTCGGACTGGAGTCAAACTC 79418
Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354
|| |||||||||||||||| ||||||| ||||||||| || ||||||||||||||| |||
Sbjct 79417 AATAGGGTCTTCTTTCCCCACTGATTCTGCCAAGCCCATTTCCTTGGCTGTGGTTTGGCT 79358
Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414
||||||||| ||||||| || ||| |||||||||| |||||| || |||||||||||||
Sbjct 79357 GGATAGTAGACAGGGACATTGAGAACCTCGTTAATCTATTCATACGGGTCACTAATTAGA 79298
Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
||||||||||||||| |||||||||||||| ||| ||||| ||| || ||| ||||||||
Sbjct 79297 TGACGAGGCATTTGGTTACCTTAAGAGAGTTATATTTACT-CCGTCG-TTAACCGCGCTT 79240
Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534
|||||||||||||||| |||||||||| ||| ||| |||||||||||||||| | |||
Sbjct 79239 GGTTGAATTTCTTCACCTTGACATTCATTTCACAGGGTAGAAATCACATTGCGTTAGCAT 79180
Query 535 C 535
|
Sbjct 79179 C 79179
>seq36
Length=1858375
Score = 268 bits (296), Expect = 3e-69
Identities = 172/188 (91%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 235 GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294
|||| | |||||| |||||||||||| ||||||||||||||| ||||||||||||| |||
Sbjct 13637 GGCTACGACTTATCCTACACCTCTCATGTCATTTCACAAAGTAGGACTAGAGTCAAACTC 13578
Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354
|| |||||||||||||||| ||||||| ||||||| | || |||||||||||||||||||
Sbjct 13577 AATAGGGTCTTCTTTCCCCACTGATTCTGCCAAGCACATTTCCTTGGCTGTGGTTTCGCT 13518
Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414
||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 13517 GGATAGTAGACAGGGACAGTGGGAATCTTGTTAATCCATTCATGCGCGTCACTAATTAGA 13458
Query 415 TGACGAGG 422
||| ||||
Sbjct 13457 TGATGAGG 13450
>seq97
Length=906600
Score = 196 bits (216), Expect = 2e-47
Identities = 153/178 (86%), Gaps = 6/178 (3%)
Strand=Plus/Plus
Query 249 CTACACCTCTCAAGTCATTTCACAAAGTCGGACTAG--AGTCAAGCTCAACAGGGTC--T 304
||||||||| |||||||||||||||| |||||| |||||| | | ||| || |
Sbjct 849686 CTACACCTCCTCAGTCATTTCACAAAGT-GGACTATGAAGTCAAACCTCATAGGATCACT 849744
Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364
||||||||| ||||||| ||||||| | || ||||||||||||||||||| |||||| ||
Sbjct 849745 TCTTTCCCCACTGATTCTGCCAAGCACATTTCCTTGGCTGTGGTTTCGCTGGATAGTCGA 849804
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 849805 CAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGC-ACACTAATTAGATGACGAGG 849861
>seq14
Length=2986515
Score = 100 bits (110), Expect = 9e-19
Identities = 61/65 (94%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127
|||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 900658 TTTAACAGATATGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATCG 900599
Query 128 GCCCG 132
|||||
Sbjct 900598 GCCCG 900594
>seq321
Length=132638
Score = 78.8 bits (86), Expect = 3e-12
Identities = 81/106 (76%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| ||||
Sbjct 109238 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 109179
Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
||||||||| || ||| | ||||||| |||||||||||| | ||||
Sbjct 109178 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTT 109133
>seq208
Length=245570
Score = 78.8 bits (86), Expect = 3e-12
Identities = 81/106 (76%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| ||||
Sbjct 201244 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 201303
Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
||||||||| || ||| | ||||||| |||||||||||| | ||||
Sbjct 201304 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTT 201349
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635185348608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |