Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31]
896 sequences; 295,462,401 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq321 196 2e-47
seq208 196 2e-47
>seq321
Length=132638
Score = 196 bits (216), Expect = 2e-47
Identities = 387/570 (68%), Gaps = 42/570 (7%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
||||| || ||||| |||||| || ||| | | |||| ||||| | | || | |
Sbjct 109596 TCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCACGAGCAGAAT--C 109539
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
|| | |||| ||||| | | |||||||||| ||| ||||| || |||||||||
Sbjct 109538 AAT--GCTTGAGCCTACCTTCGCACACCTCCGTTACTCTTTAGGAGG-CATCCGCCCCAG 109482
Query 121 TTAAACTACCCACCAGGCACTGTCCC---CAACCCAGATCATGGG--CCAAGGTTAGATA 175
||||||||||||| ||| |||||| | ||| || || || | |||||| |
Sbjct 109481 ATAAACTACCCACCTCGCAGTGTCCCGCCCCCCCCGAATGATCGGTGCGGCGGTTAGGCA 109422
Query 176 TCCACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATC 235
||| | |||||||| ||||| | | || | | ||| | || |
Sbjct 109421 TCCTTAGACGAAAGAGTGGTCTTTCAGGATTGG-TCG--------TTGTGTGTCACCACC 109371
Query 236 ATAGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAG 295
|||||||||||||||||| | | || || | | |||||||||| |||
Sbjct 109370 ------TCCCACCTATCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTCAAG 109317
Query 296 GTCC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTT 354
|| | ||||||||| |||| |||| | | ||||||| || | | ||||||
Sbjct 109316 GTGCACGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTT 109257
Query 355 CACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACT 414
||||||| | || |||||||| ||| ||||||||| |||||||||||||||| |||
Sbjct 109256 CACCGGGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACT 109197
Query 415 TACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGG 474
|| |||||||||||||||||||||||||| |||| |||||| ||||||||||| |||
Sbjct 109196 TATGCGACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGG 109137
Query 475 GCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAG 534
||||| ||| || | ||||| | |||| |||||||||
Sbjct 109136 GCTTCCATTCAAAGCTTATCACACTTC----------------TCCTTCCGACCTTCCAG 109093
Query 535 CACCGGGCAGGCGTCAGTCCGTATACCTCG 564
||||||||||| ||||| | ||||| |||
Sbjct 109092 CACCGGGCAGGTGTCAGACTCTATACATCG 109063
>seq208
Length=245570
Score = 196 bits (216), Expect = 2e-47
Identities = 387/570 (68%), Gaps = 42/570 (7%)
Strand=Plus/Plus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
||||| || ||||| |||||| || ||| | | |||| ||||| | | || | |
Sbjct 200886 TCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCACGAGCAGAAT--C 200943
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
|| | |||| ||||| | | |||||||||| ||| ||||| || |||||||||
Sbjct 200944 AAT--GCTTGAGCCTACCTTCGCACACCTCCGTTACTCTTTAGGAGG-CATCCGCCCCAG 201000
Query 121 TTAAACTACCCACCAGGCACTGTCCC---CAACCCAGATCATGGG--CCAAGGTTAGATA 175
||||||||||||| ||| |||||| | ||| || || || | |||||| |
Sbjct 201001 ATAAACTACCCACCTCGCAGTGTCCCGCCCCCCCCGAATGATCGGTGCGGCGGTTAGGCA 201060
Query 176 TCCACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATC 235
||| | |||||||| ||||| | | || | | ||| | || |
Sbjct 201061 TCCTTAGACGAAAGAGTGGTCTTTCAGGATTGG-TCG--------TTGTGTGTCACCACC 201111
Query 236 ATAGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAG 295
|||||||||||||||||| | | || || | | |||||||||| |||
Sbjct 201112 ------TCCCACCTATCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTCAAG 201165
Query 296 GTCC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTT 354
|| | ||||||||| |||| |||| | | ||||||| || | | ||||||
Sbjct 201166 GTGCACGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTT 201225
Query 355 CACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACT 414
||||||| | || |||||||| ||| ||||||||| |||||||||||||||| |||
Sbjct 201226 CACCGGGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACT 201285
Query 415 TACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGG 474
|| |||||||||||||||||||||||||| |||| |||||| ||||||||||| |||
Sbjct 201286 TATGCGACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGG 201345
Query 475 GCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAG 534
||||| ||| || | ||||| | |||| |||||||||
Sbjct 201346 GCTTCCATTCAAAGCTTATCACACTTC----------------TCCTTCCGACCTTCCAG 201389
Query 535 CACCGGGCAGGCGTCAGTCCGTATACCTCG 564
||||||||||| ||||| | ||||| |||
Sbjct 201390 CACCGGGCAGGTGTCAGACTCTATACATCG 201419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1702384746496
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |