Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq321 196 2e-47 seq208 196 2e-47 >seq321 Length=132638 Score = 196 bits (216), Expect = 2e-47 Identities = 387/570 (68%), Gaps = 42/570 (7%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || ||||| |||||| || ||| | | |||| ||||| | | || | | Sbjct 109596 TCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCACGAGCAGAAT--C 109539 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | |||| ||||| | | |||||||||| ||| ||||| || ||||||||| Sbjct 109538 AAT--GCTTGAGCCTACCTTCGCACACCTCCGTTACTCTTTAGGAGG-CATCCGCCCCAG 109482 Query 121 TTAAACTACCCACCAGGCACTGTCCC---CAACCCAGATCATGGG--CCAAGGTTAGATA 175 ||||||||||||| ||| |||||| | ||| || || || | |||||| | Sbjct 109481 ATAAACTACCCACCTCGCAGTGTCCCGCCCCCCCCGAATGATCGGTGCGGCGGTTAGGCA 109422 Query 176 TCCACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATC 235 ||| | |||||||| ||||| | | || | | ||| | || | Sbjct 109421 TCCTTAGACGAAAGAGTGGTCTTTCAGGATTGG-TCG--------TTGTGTGTCACCACC 109371 Query 236 ATAGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAG 295 |||||||||||||||||| | | || || | | |||||||||| ||| Sbjct 109370 ------TCCCACCTATCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTCAAG 109317 Query 296 GTCC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTT 354 || | ||||||||| |||| |||| | | ||||||| || | | |||||| Sbjct 109316 GTGCACGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTT 109257 Query 355 CACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACT 414 ||||||| | || |||||||| ||| ||||||||| |||||||||||||||| ||| Sbjct 109256 CACCGGGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACT 109197 Query 415 TACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGG 474 || |||||||||||||||||||||||||| |||| |||||| ||||||||||| ||| Sbjct 109196 TATGCGACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGG 109137 Query 475 GCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAG 534 ||||| ||| || | ||||| | |||| ||||||||| Sbjct 109136 GCTTCCATTCAAAGCTTATCACACTTC----------------TCCTTCCGACCTTCCAG 109093 Query 535 CACCGGGCAGGCGTCAGTCCGTATACCTCG 564 ||||||||||| ||||| | ||||| ||| Sbjct 109092 CACCGGGCAGGTGTCAGACTCTATACATCG 109063 >seq208 Length=245570 Score = 196 bits (216), Expect = 2e-47 Identities = 387/570 (68%), Gaps = 42/570 (7%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || ||||| |||||| || ||| | | |||| ||||| | | || | | Sbjct 200886 TCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCACGAGCAGAAT--C 200943 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | |||| ||||| | | |||||||||| ||| ||||| || ||||||||| Sbjct 200944 AAT--GCTTGAGCCTACCTTCGCACACCTCCGTTACTCTTTAGGAGG-CATCCGCCCCAG 201000 Query 121 TTAAACTACCCACCAGGCACTGTCCC---CAACCCAGATCATGGG--CCAAGGTTAGATA 175 ||||||||||||| ||| |||||| | ||| || || || | |||||| | Sbjct 201001 ATAAACTACCCACCTCGCAGTGTCCCGCCCCCCCCGAATGATCGGTGCGGCGGTTAGGCA 201060 Query 176 TCCACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATC 235 ||| | |||||||| ||||| | | || | | ||| | || | Sbjct 201061 TCCTTAGACGAAAGAGTGGTCTTTCAGGATTGG-TCG--------TTGTGTGTCACCACC 201111 Query 236 ATAGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAG 295 |||||||||||||||||| | | || || | | |||||||||| ||| Sbjct 201112 ------TCCCACCTATCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTCAAG 201165 Query 296 GTCC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTT 354 || | ||||||||| |||| |||| | | ||||||| || | | |||||| Sbjct 201166 GTGCACGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTT 201225 Query 355 CACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACT 414 ||||||| | || |||||||| ||| ||||||||| |||||||||||||||| ||| Sbjct 201226 CACCGGGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACT 201285 Query 415 TACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGG 474 || |||||||||||||||||||||||||| |||| |||||| ||||||||||| ||| Sbjct 201286 TATGCGACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGG 201345 Query 475 GCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAG 534 ||||| ||| || | ||||| | |||| ||||||||| Sbjct 201346 GCTTCCATTCAAAGCTTATCACACTTC----------------TCCTTCCGACCTTCCAG 201389 Query 535 CACCGGGCAGGCGTCAGTCCGTATACCTCG 564 ||||||||||| ||||| | ||||| ||| Sbjct 201390 CACCGGGCAGGTGTCAGACTCTATACATCG 201419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702384746496