Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31]
896 sequences; 295,462,401 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq144 123 5e-26
seq208 116 8e-24
>seq144
Length=473486
Score = 123 bits (136), Expect = 5e-26
Identities = 196/281 (70%), Gaps = 20/281 (7%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| | || ||| || |
Sbjct 55058 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 55106
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACA--ATCCGTAGAACCTTCATCCTTCAC 118
| || ||| | | ||||||||| | || | |||| | ||||| ||| |||
Sbjct 55107 GC------TTCTTCTCCGAGAAAAGAAGTGTTCACGACCCGTGGG-CCTTCTACCTCCAC 55159
Query 119 GCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGT 178
|| | | ||| |||| || ||| |||||| || ||||| ||||||||||||||||
Sbjct 55160 GCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGT 55219
Query 179 AGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCC 238
|||||| ||| |||||||||||| ||| ||||| || | ||||||| || | |||
Sbjct 55220 AGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTG 55279
Query 239 ATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
||| | | || ||| || || || | || |||| |||||
Sbjct 55280 ATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 55320
>seq208
Length=245570
Score = 116 bits (128), Expect = 8e-24
Identities = 145/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164
||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| ||
Sbjct 115351 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 115410
Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224
|||||||| ||||| ||||| || |||||||||||| ||| ||||| || | |||
Sbjct 115411 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 115470
Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284
||| | ||| |||| | |||| ||| ||| ||||| || |||||||||| ||
Sbjct 115471 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTAC 115530
Query 285 GCATCCCCATCGTACACCG 303
||| | |||| ||| ||
Sbjct 115531 GCAGGCTCATCAAACAGCG 115549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1068790423552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |