Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq144 123 5e-26 seq208 116 8e-24 >seq144 Length=473486 Score = 123 bits (136), Expect = 5e-26 Identities = 196/281 (70%), Gaps = 20/281 (7%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| | || ||| || | Sbjct 55058 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 55106 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACA--ATCCGTAGAACCTTCATCCTTCAC 118 | || ||| | | ||||||||| | || | |||| | ||||| ||| ||| Sbjct 55107 GC------TTCTTCTCCGAGAAAAGAAGTGTTCACGACCCGTGGG-CCTTCTACCTCCAC 55159 Query 119 GCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGT 178 || | | ||| |||| || ||| |||||| || ||||| |||||||||||||||| Sbjct 55160 GCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGT 55219 Query 179 AGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCC 238 |||||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| Sbjct 55220 AGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTG 55279 Query 239 ATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 ||| | | || ||| || || || | || |||| ||||| Sbjct 55280 ATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 55320 >seq208 Length=245570 Score = 116 bits (128), Expect = 8e-24 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 ||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| || Sbjct 115351 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 115410 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 |||||||| ||||| ||||| || |||||||||||| ||| ||||| || | ||| Sbjct 115411 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 115470 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284 ||| | ||| |||| | |||| ||| ||| ||||| || |||||||||| || Sbjct 115471 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTAC 115530 Query 285 GCATCCCCATCGTACACCG 303 ||| | |||| ||| || Sbjct 115531 GCAGGCTCATCAAACAGCG 115549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068790423552