Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zea_20mays_20[refseq_20GCF_5F000005005.2_202017-02-07] 267 sequences; 2,135,083,061 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq267 219 1e-54 seq266 219 1e-54 seq7 219 1e-54 seq1 219 1e-54 seq2 197 4e-48 seq10 156 1e-35 seq3 141 2e-31 >seq267 Length=140384 Score = 219 bits (242), Expect = 1e-54 Identities = 298/411 (73%), Gaps = 6/411 (1%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||||||||||||||||||| || ||| ||| Sbjct 95594 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 95653 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | ||| | | || Sbjct 95654 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGT 95713 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 95714 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 95773 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| ||||||||| | || || | | ||||||||| || Sbjct 95774 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGG 95833 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | |||||||| |||||||||| | Sbjct 95834 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGG 95893 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTG-GGGA-TTTA 360 ||||||| |||| ||||||| ||| |||||||| ||||| || || | || | | Sbjct 95894 GATTAGAGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGCTGTGCGACTCGA 95953 Query 361 CTTCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 95954 C--CCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 96002 Score = 219 bits (242), Expect = 1e-54 Identities = 298/411 (73%), Gaps = 6/411 (1%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||||||||||||||||||| || ||| ||| Sbjct 127143 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 127084 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | ||| | | || Sbjct 127083 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGT 127024 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 127023 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 126964 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| ||||||||| | || || | | ||||||||| || Sbjct 126963 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGG 126904 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | |||||||| |||||||||| | Sbjct 126903 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGG 126844 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTG-GGGA-TTTA 360 ||||||| |||| ||||||| ||| |||||||| ||||| || || | || | | Sbjct 126843 GATTAGAGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGCTGTGCGACTCGA 126784 Query 361 CTTCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 126783 C--CCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 126735 >seq266 Length=569630 Score = 219 bits (242), Expect = 1e-54 Identities = 298/411 (73%), Gaps = 6/411 (1%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||||||||||||||||||| || ||| ||| Sbjct 329087 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 329028 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | ||| | | || Sbjct 329027 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGT 328968 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 328967 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 328908 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| ||||||||| | || || | | ||||||||| || Sbjct 328907 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGG 328848 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | |||||||| |||||||||| | Sbjct 328847 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGG 328788 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTG-GGGA-TTTA 360 ||||||| |||| ||||||| ||| |||||||| ||||| || || | || | | Sbjct 328787 GATTAGAGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGCTGTGCGACTCGA 328728 Query 361 CTTCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 328727 C--CCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 328679 Score = 201 bits (222), Expect = 3e-49 Identities = 247/334 (74%), Gaps = 10/334 (3%) Strand=Plus/Minus Query 8 GAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCG 67 || ||| |||| |||||||||| |||||||||||||||||||| ||| ||| ||||| | Sbjct 421057 GAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTG 420998 Query 68 TTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGT---TGTGTAAGACAGGTGTGA 124 || ||||||| ||||||||||||| | || ||||||| | | || || ||| Sbjct 420997 TTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAG---TGA 420941 Query 125 AATCCCCGGGCTTAACCTGG-GAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAG 183 || | | | || ||| | | ||| | | || ||| ||||| | ||||| Sbjct 420940 AAGTCGC---CAAAAAGTGGCGGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAG 420884 Query 184 GGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGC 243 | | |||||||| | |||||| ||||||| ||||||| | | |||||| |||| || Sbjct 420883 GAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGTAGATCTACGAAGGAACGCCAAAAGC 420824 Query 244 GAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGG 303 ||||||||| | ||||| || |||||| | ||||||| |||||||| |||||| Sbjct 420823 GAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCGAAAGCATGGGGAGCGAACAGG 420764 Query 304 ATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||||||||||||||||| ||| |||||||| Sbjct 420763 ATTAGATACCCTGGTAGTCCATGCCGTAAACGAT 420730 >seq7 Length=182381542 Score = 219 bits (242), Expect = 1e-54 Identities = 298/411 (73%), Gaps = 6/411 (1%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||||||||||||||||||| || ||| ||| Sbjct 46262877 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 46262936 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | ||| | | || Sbjct 46262937 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGT 46262996 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 46262997 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 46263056 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| ||||||||| | || || | | ||||||||| || Sbjct 46263057 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGG 46263116 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | |||||||| |||||||||| | Sbjct 46263117 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGG 46263176 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTG-GGGA-TTTA 360 ||||||| |||| ||||||| ||| |||||||| ||||| || || | || | | Sbjct 46263177 GATTAGAGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGCTGTGCGACTCGA 46263236 Query 361 CTTCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 46263237 C--CCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 46263285 Score = 201 bits (222), Expect = 3e-49 Identities = 294/411 (72%), Gaps = 6/411 (1%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| |||| |||||||||||||| || ||| ||| Sbjct 46248237 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCTAGCAGCCGCGGTAAGACAGAGGATGC 46248296 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| | |||| | |||||||||||||| | ||| || | | ||| | || Sbjct 46248297 AAGCGTTATCCAGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCACCGT 46248356 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 46248357 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 46248416 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| ||||||||| | || || | | ||||||||| || Sbjct 46248417 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGG 46248476 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | || ||||| |||||||||| | Sbjct 46248477 CGAAAGCACTCTTCTGGGCCGACACTGACACTGAGAGACAAAAGCTAGGGGAGCAAATGG 46248536 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTG-GGGA-TTTA 360 ||||||| |||| ||||||| ||| |||||||| ||||| || || | || | | Sbjct 46248537 GATTAGAGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGCTGTGCGACTCGA 46248596 Query 361 CTTCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 46248597 C--CCGTGCAGTGTTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 46248645 Score = 109 bits (120), Expect = 1e-21 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 2 ATACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTG 61 ||| || | ||||||||| ||||||||| |||||| |||||||||||| || ||| || Sbjct 134388320 ATATCTCAGGAATAAGCATCGGCTAACTCTGTGCCAACAGCCGCGGTAAGACACAGGATG 134388261 Query 62 CAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTG 121 ||||||||| |||||| | |||||||||||||| | ||| || | | | | | | Sbjct 134388260 CAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTTTGTAGGTGGCTTTTCATGTATGTCG 134388201 Query 122 TGAAATCCCCGGGCTTAACC 141 | ||||||| ||||| |||| Sbjct 134388200 TCAAATCCCAGGGCTCAACC 134388181 Score = 84.2 bits (92), Expect = 6e-14 Identities = 116/158 (73%), Gaps = 6/158 (4%) Strand=Plus/Plus Query 256 CTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCT 315 ||||| |||||||| || | |||||||| |||||||||| |||||||| |||| Sbjct 126098507 CTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGGGATTAGAGACCCC 126098566 Query 316 GGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGG-GATTT-ACTTCCTTG--GTA 371 ||||||| ||| |||||||| ||||| || || | || | || || || || Sbjct 126098567 AGTAGTCCTAGCCGTAAACGATGGATACTAGGTGCTGTGCGACTCGAC--CCGTGCAGTG 126098624 Query 372 ACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 ||||||||||||| |||| ||||||||||| ||| Sbjct 126098625 CTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 126098662 >seq1 Length=307041717 Score = 219 bits (242), Expect = 1e-54 Identities = 298/411 (73%), Gaps = 6/411 (1%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||||||||||||||||||| || ||| ||| Sbjct 56684443 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 56684384 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | ||| | | || Sbjct 56684383 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGT 56684324 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 56684323 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 56684264 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| ||||||||| | || || | | ||||||||| || Sbjct 56684263 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGG 56684204 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | |||||||| |||||||||| | Sbjct 56684203 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGG 56684144 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTG-GGGA-TTTA 360 ||||||| |||| ||||||| ||| |||||||| ||||| || || | || | | Sbjct 56684143 GATTAGAGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGCTGTGCGACTCGA 56684084 Query 361 CTTCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 56684083 C--CCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 56684035 Score = 192 bits (212), Expect = 2e-46 Identities = 291/411 (71%), Gaps = 6/411 (1%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||||||||||||||||||| || ||| ||| Sbjct 15413909 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 15413850 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | ||| | | || Sbjct 15413849 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGT 15413790 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 |||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 15413789 CAAATCCTAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 15413730 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| ||||||||| | || || | | ||||||||| || Sbjct 15413729 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGG 15413670 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| ||| |||| || | |||||||| |||||||||| | Sbjct 15413669 CGAAAGCACTCTGCTGGGCCGACATTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGG 15413610 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTG--TTGGGGATTTA 360 ||||| |||| ||||||| ||| |||||||| ||||| || || | | | Sbjct 15413609 GATTAAGGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGCTATGCGACTCGA 15413550 Query 361 CTTCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || || || ||||||||||||| |||| ||| ||||||| ||| Sbjct 15413549 C--CCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGGCTGGGGAGTAC 15413501 Score = 91.5 bits (100), Expect = 4e-16 Identities = 83/105 (79%), Gaps = 6/105 (6%) Strand=Plus/Minus Query 8 GAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATAC------GTAGGGTG 61 || ||| |||| |||||||||| |||||||||||||||||||| || | ||| | Sbjct 25984489 GAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGGGGGGG 25984430 Query 62 CAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGT 106 |||| ||| ||||||| ||||||||||||| | || ||||||| Sbjct 25984429 CAAGTGTTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGT 25984385 Score = 87.8 bits (96), Expect = 5e-15 Identities = 132/183 (72%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 231 GAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTG 290 ||||||||| | |||| ||| | ||||| |||| ||| || | |||||||| | Sbjct 105341116 GAACACCAACGACGAAAGCACTCTGCTGGGCCGACACCGACACTAAGAGACGAAAGCTAG 105341175 Query 291 GGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGT 350 ||||||||| |||||||| |||| ||||||| ||| |||||||| ||||| ||| Sbjct 105341176 GGGAGCAAATGGGATTAGAGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGT 105341235 Query 351 TGGG-GATTT-ACTTCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAA 406 || | || | || || || || |||||||||||| |||| |||||| |||| Sbjct 105341236 TGTGCGACTCGAC--CCGTGCAGTGCTATAGCTAACGCGTTAAGTATCCCGCCTAGGGAG 105341293 Query 407 TAC 409 ||| Sbjct 105341294 TAC 105341296 >seq2 Length=244442276 Score = 197 bits (218), Expect = 4e-48 Identities = 294/411 (72%), Gaps = 7/411 (2%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||||||||| ||||| ||| || ||| ||| Sbjct 98047082 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAACCGCGTTAAGACTGAGGATGC 98047141 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | ||| | | ||| Sbjct 98047142 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCTGT 98047201 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| || || Sbjct 98047202 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTATGGTAGG 98047261 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| ||||||||| | || || | | ||||||||| || Sbjct 98047262 GGCAGACGGAATTTCCAGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGG 98047321 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 || ||| | ||||| ||| |||| || | || ||||| |||||||||| | Sbjct 98047322 AAAAAGCACTCTGCTGGGCCGACATTGACACTGAGAGAC-AAAGCTAGGGGAGCAAATGG 98047380 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTG-GGGA-TTTA 360 ||||||| |||| ||||||| ||| |||||||| ||||| || || | || | | Sbjct 98047381 GATTAGAGACCCCCGTAGTCCTAGCCGTAAACGATGGATACTAGGTGCTGTGCGACTCGA 98047440 Query 361 CTTCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 98047441 C--CCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 98047489 Score = 107 bits (118), Expect = 5e-21 Identities = 86/104 (83%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||||||||||||||||||| || ||| ||| Sbjct 14974737 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 14974796 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGT 106 |||||||| |||||| | |||| ||||||||| | ||| ||| Sbjct 14974797 AAGCGTTATCCGGAATGATTGGGTGTAAAGCGTCTGTAGGTGGT 14974840 >seq10 Length=150982314 Score = 156 bits (172), Expect = 1e-35 Identities = 248/351 (71%), Gaps = 6/351 (2%) Strand=Plus/Plus Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 ||| |||| || ||| | |||||||||||||| | ||| || | | ||| | | || Sbjct 51055911 AAGTGTTATCCGAAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGT 51055970 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 51055971 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 51056030 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| ||||||||| | || || | | ||||||||| || Sbjct 51056031 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGG 51056090 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | |||||||| |||||||||| | Sbjct 51056091 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGG 51056150 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTG-GGGA-TTTA 360 ||||||| ||||| ||||||| ||| |||||||| ||||| ||||| | || | | Sbjct 51056151 GATTAGAGACCCTAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGTTGTGCGACTCGA 51056210 Query 361 CTTCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || || || |||||||||||||| |||| ||||||||||| ||| Sbjct 51056211 C--CCGTGTAGTGTCGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 51056259 Score = 136 bits (150), Expect = 1e-29 Identities = 179/248 (72%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||||||||||||||||||| || ||| ||| Sbjct 48831510 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 48831451 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | ||| | | || Sbjct 48831450 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGT 48831391 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| | | | | | ||| | || |||| | || Sbjct 48831390 CAAATCCCAGGGCTCAACCCTGAACAGGTGGTGGAAACTACCAAGCTGGAGTACGGTAGG 48831331 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| ||||||||| | || || | | ||||||||| || Sbjct 48831330 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGG 48831271 Query 243 CGAAGGCA 250 |||| ||| Sbjct 48831270 CGAAAGCA 48831263 Score = 113 bits (124), Expect = 1e-22 Identities = 162/224 (72%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||| | ||| ||| ||||||||| | || || | | ||||||||| |||||| || Sbjct 48844929 GGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGGCGAAAGC 48844988 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 | | ||||| |||||| | || | |||||||| |||||||||| |||||||| Sbjct 48844989 ACTCTGCTGGGCCGACACTGGCACTGAGAGACGAAAGCTAGGGGAGCAAATGGGATTAGA 48845048 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGG-GATTT-ACTTCCTT 367 |||| ||||||| ||| |||||||| ||||| || || | || | || || | Sbjct 48845049 GACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGCTGTGCGACTCGAC--CCGT 48845106 Query 368 G--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || ||||||||||||| |||| || |||||||| ||| Sbjct 48845107 GCAGTGCTGTAGCTAACGCGTTAAGTATCCCACCTGGGGAGTAC 48845150 >seq3 Length=235667834 Score = 141 bits (156), Expect = 2e-31 Identities = 134/171 (78%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 167 ACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGT 226 ||| ||||| | |||||| | |||||||| | |||||| ||||||| |||||| | Sbjct 139010994 ACTTGAGTGAGACAGAGGAGAGTGGAATTTCGTGTGTAGGGGTGAAATCAGTAGATCTAC 139010935 Query 227 GGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAG 286 | |||||| |||| ||||||||||| | ||||| || |||||| | |||||| Sbjct 139010934 GAAGGAACGCCAAAAGCGAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCGAAAG 139010875 Query 287 CGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 | |||||||| |||||||||||||||||| |||||||| ||| |||||||| Sbjct 139010874 CATGGGGAGCGAACAGGATTAGATACCCTAGTAGTCCATGCCGTAAACGAT 139010824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289596556768