Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zea_20mays_20[refseq_20GCF_5F000005005.2_202017-02-07] 267 sequences; 2,135,083,061 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq138 89.7 9e-16 >seq138 Length=254428 Score = 89.7 bits (98), Expect = 9e-16 Identities = 101/134 (75%), Gaps = 1/134 (1%) Strand=Plus/Plus Query 97 CAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCG 156 || |||||||||| | | ||||| || || ||||| || |||||||| || || || Sbjct 121155 CATGGAAGGCTTCCT-GAGGAATGTCGACAGATCCCACACGTTTCATGCGCTTCTTGCCT 121213 Query 157 GCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCC 216 ||||||||||||| |||| ||| ||| || | | |||||||| ||||| |||||| Sbjct 121214 TCCTTTTGCTTCTCTAGCAACTTCTTCTTCCGAGTAATATCACCGCCATAGCACTTGGCC 121273 Query 217 AGTACGTTCTTTCT 230 || || ||||| || Sbjct 121274 AGGACATTCTTCCT 121287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838397761472