Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zea_20mays_20[refseq_20GCF_5F000005005.2_202017-02-07]
267 sequences; 2,135,083,061 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq267 264 3e-68
seq266 264 3e-68
seq7 264 3e-68
seq1 264 3e-68
seq2 233 5e-59
seq10 208 2e-51
seq3 132 1e-28
seq4 87.8 4e-15
>seq267
Length=140384
Score = 264 bits (292), Expect = 3e-68
Identities = 303/405 (75%), Gaps = 2/405 (0%)
Strand=Plus/Plus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64
|||||| |||| ||||||||| ||||||||||||||||||| || ||| || |||
Sbjct 95598 TGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGC 95657
Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124
|||||||||||| | ||||||||||| || |||||||| || | ||||| | || |||
Sbjct 95658 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGTCAAA 95717
Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184
| | |||||||||| || || | |||||| | ||| |||| | | |||||||
Sbjct 95718 TCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCA 95777
Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244
|||||| | ||| ||||||||||||| | || || | | |||||||| ||||||
Sbjct 95778 GAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGGCGAA 95837
Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304
|| |||||| | | |||||||||||| ||||||| |||||||||| |||||
Sbjct 95838 AGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGGGATT 95897
Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCG-CATAAGTG 363
||| |||| ||||||| ||||||||||||| |||||||||| | | ||| | |
Sbjct 95898 AGAGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTG-CTGTGCGACTCGACCC 95956
Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | |||| | ||| ||||| ||||||| || |||||||||||
Sbjct 95957 GTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 96001
Score = 264 bits (292), Expect = 3e-68
Identities = 303/405 (75%), Gaps = 2/405 (0%)
Strand=Plus/Minus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64
|||||| |||| ||||||||| ||||||||||||||||||| || ||| || |||
Sbjct 127139 TGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGC 127080
Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124
|||||||||||| | ||||||||||| || |||||||| || | ||||| | || |||
Sbjct 127079 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGTCAAA 127020
Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184
| | |||||||||| || || | |||||| | ||| |||| | | |||||||
Sbjct 127019 TCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCA 126960
Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244
|||||| | ||| ||||||||||||| | || || | | |||||||| ||||||
Sbjct 126959 GAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGGCGAA 126900
Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304
|| |||||| | | |||||||||||| ||||||| |||||||||| |||||
Sbjct 126899 AGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGGGATT 126840
Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCG-CATAAGTG 363
||| |||| ||||||| ||||||||||||| |||||||||| | | ||| | |
Sbjct 126839 AGAGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTG-CTGTGCGACTCGACCC 126781
Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | |||| | ||| ||||| ||||||| || |||||||||||
Sbjct 126780 GTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 126736
>seq266
Length=569630
Score = 264 bits (292), Expect = 3e-68
Identities = 303/405 (75%), Gaps = 2/405 (0%)
Strand=Plus/Minus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64
|||||| |||| ||||||||| ||||||||||||||||||| || ||| || |||
Sbjct 329083 TGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGC 329024
Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124
|||||||||||| | ||||||||||| || |||||||| || | ||||| | || |||
Sbjct 329023 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGTCAAA 328964
Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184
| | |||||||||| || || | |||||| | ||| |||| | | |||||||
Sbjct 328963 TCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCA 328904
Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244
|||||| | ||| ||||||||||||| | || || | | |||||||| ||||||
Sbjct 328903 GAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGGCGAA 328844
Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304
|| |||||| | | |||||||||||| ||||||| |||||||||| |||||
Sbjct 328843 AGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGGGATT 328784
Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCG-CATAAGTG 363
||| |||| ||||||| ||||||||||||| |||||||||| | | ||| | |
Sbjct 328783 AGAGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTG-CTGTGCGACTCGACCC 328725
Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | |||| | ||| ||||| ||||||| || |||||||||||
Sbjct 328724 GTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 328680
Score = 226 bits (250), Expect = 7e-57
Identities = 256/340 (75%), Gaps = 10/340 (3%)
Strand=Plus/Minus
Query 2 ACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCT 61
||| ||||| |||||||||||||||| |||||||||||||||||||| ||| ||||||
Sbjct 421061 ACTCGAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCA 421002
Query 62 AGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTG 121
|| ||| | |||||| ||||||||||||||| |||||| ||| | || | |||
Sbjct 421001 AGTGTTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAGTG 420942
Query 122 AAAGGCTATGGCTCAACCCCG-GGACTGCTTTTGAAAC---TGCAGGGCTAGAGTGCAGG 177
|||| | | | || | ||| |||| | ||||| | || || |||||
Sbjct 420941 AAAGTC---GCCAAAAAGTGGCGGAATGCTCTCGAAACCAATTCA---CTTGAGTGAGAC 420888
Query 178 AGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAG 237
|| || ||||||||| | |||||| |||||||| ||||||| | | |||||| |||
Sbjct 420887 AGAGGAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGTAGATCTACGAAGGAACGCCAA 420828
Query 238 TGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAA 297
|||||||| ||| |||| || ||| ||| || ||||||| |||||||| ||
Sbjct 420827 AAGCGAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCGAAAGCATGGGGAGCGAA 420768
Query 298 CAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337
||||||||||||||||||||||||| ||||||||||||||
Sbjct 420767 CAGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGA 420728
>seq7
Length=182381542
Score = 264 bits (292), Expect = 3e-68
Identities = 303/405 (75%), Gaps = 2/405 (0%)
Strand=Plus/Plus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64
|||||| |||| ||||||||| ||||||||||||||||||| || ||| || |||
Sbjct 46262881 TGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGC 46262940
Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124
|||||||||||| | ||||||||||| || |||||||| || | ||||| | || |||
Sbjct 46262941 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGTCAAA 46263000
Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184
| | |||||||||| || || | |||||| | ||| |||| | | |||||||
Sbjct 46263001 TCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCA 46263060
Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244
|||||| | ||| ||||||||||||| | || || | | |||||||| ||||||
Sbjct 46263061 GAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGGCGAA 46263120
Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304
|| |||||| | | |||||||||||| ||||||| |||||||||| |||||
Sbjct 46263121 AGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGGGATT 46263180
Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCG-CATAAGTG 363
||| |||| ||||||| ||||||||||||| |||||||||| | | ||| | |
Sbjct 46263181 AGAGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTG-CTGTGCGACTCGACCC 46263239
Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | |||| | ||| ||||| ||||||| || |||||||||||
Sbjct 46263240 GTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 46263284
Score = 237 bits (262), Expect = 4e-60
Identities = 297/405 (73%), Gaps = 2/405 (0%)
Strand=Plus/Plus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64
|||||| |||| ||||||||| |||| |||||||||||||| || ||| || |||
Sbjct 46248241 TGAGGAATAAGCATCGGCTAACTCTGTGCTAGCAGCCGCGGTAAGACAGAGGATGCAAGC 46248300
Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124
||||||| |||| | ||||||||||| || |||||||| || | ||||| || |||
Sbjct 46248301 GTTATCCAGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCACCGTCAAA 46248360
Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184
| | |||||||||| || || | |||||| | ||| |||| | | |||||||
Sbjct 46248361 TCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCA 46248420
Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244
|||||| | ||| ||||||||||||| | || || | | |||||||| ||||||
Sbjct 46248421 GAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGGCGAA 46248480
Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304
|| | |||| | | |||||||||||| | ||||| |||||||||| |||||
Sbjct 46248481 AGCACTCTTCTGGGCCGACACTGACACTGAGAGACAAAAGCTAGGGGAGCAAATGGGATT 46248540
Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCG-CATAAGTG 363
||| |||| ||||||| ||||||||||||| |||||||||| | | ||| | |
Sbjct 46248541 AGAGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTG-CTGTGCGACTCGACCC 46248599
Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | ||| | ||| ||||| ||||||| || |||||||||||
Sbjct 46248600 GTGCAGTGTTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 46248644
Score = 111 bits (122), Expect = 4e-22
Identities = 121/158 (77%), Gaps = 2/158 (1%)
Strand=Plus/Plus
Query 252 TGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACC 311
|||||| | | |||||||||||| ||||||| |||||||||| |||||||| |||
Sbjct 126098505 TGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGGGATTAGAGACC 126098564
Query 312 CTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCG-CATAAGTGCTCCGGT 370
| ||||||| ||||||||||||| |||||||||| | | ||| | | | | ||
Sbjct 126098565 CCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTG-CTGTGCGACTCGACCCGTGCAGT 126098623
Query 371 GCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
|| | ||| ||||| ||||||| || |||||||||||
Sbjct 126098624 GCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 126098661
Score = 102 bits (112), Expect = 2e-19
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 7 AGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGT 66
|||| |||| ||||||||| |||||| |||||||||||| || ||| || |||||
Sbjct 134388313 AGGAATAAGCATCGGCTAACTCTGTGCCAACAGCCGCGGTAAGACACAGGATGCAAGCGT 134388254
Query 67 TATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGG 126
|||||||||| | ||||||||||| || |||||||| || | | || | || |||
Sbjct 134388253 TATCCGGAATGATTGGGCGTAAAGCGTTTGTAGGTGGCTTTTCATGTATGTCGTCAAATC 134388194
Query 127 CTATGGCTCAACCC 140
| | ||||||||||
Sbjct 134388193 CCAGGGCTCAACCC 134388180
Score = 78.8 bits (86), Expect = 2e-12
Identities = 112/158 (71%), Gaps = 6/158 (4%)
Strand=Plus/Plus
Query 154 GAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATG 213
|||||| | |||||||| | | ||||| | |||||| | ||| ||||||||||||
Sbjct 25848231 GAAACTACCAAGCTAGAGTACGGTAGGGGTAGAGGGAATTTCCGGTGGAGCGGTGAAATG 25848290
Query 214 CGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTG 273
| | || || | | |||||||| |||||| || |||||| | |||||||
Sbjct 25848291 CATTGAGATCGGAAAGAACACCAACGGCGAAAGCACTCTGCTGG------GCGGACACTG 25848344
Query 274 AGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACC 311
|| ||||||| ||| |||||| |||||||| |||
Sbjct 25848345 AGAGACGAAAGCTAGGGAAGCAAATGGGATTAGAGACC 25848382
>seq1
Length=307041717
Score = 264 bits (292), Expect = 3e-68
Identities = 303/405 (75%), Gaps = 2/405 (0%)
Strand=Plus/Minus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64
|||||| |||| ||||||||| ||||||||||||||||||| || ||| || |||
Sbjct 56684439 TGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGC 56684380
Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124
|||||||||||| | ||||||||||| || |||||||| || | ||||| | || |||
Sbjct 56684379 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGTCAAA 56684320
Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184
| | |||||||||| || || | |||||| | ||| |||| | | |||||||
Sbjct 56684319 TCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCA 56684260
Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244
|||||| | ||| ||||||||||||| | || || | | |||||||| ||||||
Sbjct 56684259 GAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGGCGAA 56684200
Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304
|| |||||| | | |||||||||||| ||||||| |||||||||| |||||
Sbjct 56684199 AGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGGGATT 56684140
Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCG-CATAAGTG 363
||| |||| ||||||| ||||||||||||| |||||||||| | | ||| | |
Sbjct 56684139 AGAGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTG-CTGTGCGACTCGACCC 56684081
Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | |||| | ||| ||||| ||||||| || |||||||||||
Sbjct 56684080 GTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 56684036
Score = 246 bits (272), Expect = 7e-63
Identities = 299/405 (74%), Gaps = 2/405 (0%)
Strand=Plus/Minus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64
|||||| |||| ||||||||| ||||||||||||||||||| || ||| || |||
Sbjct 15413905 TGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGC 15413846
Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124
|||||||||||| | ||||||||||| || |||||||| || | ||||| | || |||
Sbjct 15413845 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGTCAAA 15413786
Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184
||| |||||||||| || || | |||||| | ||| |||| | | |||||||
Sbjct 15413785 TCCTAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCA 15413726
Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244
|||||| | ||| ||||||||||||| | || || | | |||||||| ||||||
Sbjct 15413725 GAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGGCGAA 15413666
Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304
|| |||||| | | | |||||||||| ||||||| |||||||||| |||||
Sbjct 15413665 AGCACTCTGCTGGGCCGACATTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGGGATT 15413606
Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCG-CATAAGTG 363
| |||| ||||||| ||||||||||||| |||||||||| | ||| | |
Sbjct 15413605 AAGGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTG-CTATGCGACTCGACCC 15413547
Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | |||| | ||| ||||| ||||||| || ||||||||||
Sbjct 15413546 GTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGGCTGGGGAGTA 15413502
Score = 141 bits (156), Expect = 2e-31
Identities = 141/183 (77%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 165 GCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTA 224
||| |||| | | ||||||| |||||| || ||| ||||||||||||| | || ||
Sbjct 62029402 GCTGGAGTACGGTAGGGGCAGAGGGAATTTCTGGTGGAGCGGTGAAATGCATTGAGATCG 62029461
Query 225 GGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAG 284
| | |||||||| |||||| || |||||| | | |||||||||||| ||||||
Sbjct 62029462 GAAAGAACACCAACGGCGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAG 62029521
Query 285 CGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAG 344
| |||||||||| |||||||| |||| ||||||| | ||||||||||| |||||||
Sbjct 62029522 CTAGGGGAGCAAATGGGATTAGAGACCCCAGTAGTCCTAGTCGTAAACGATGGATACTAG 62029581
Query 345 GTG 347
|||
Sbjct 62029582 GTG 62029584
Score = 107 bits (118), Expect = 5e-21
Identities = 89/109 (82%), Gaps = 6/109 (6%)
Strand=Plus/Minus
Query 2 ACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATAC------GTAG 55
||| ||||| |||||||||||||||| |||||||||||||||||||| || | |
Sbjct 25984493 ACTCGAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGGG 25984434
Query 56 GGGGCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGT 104
||||| || ||| | |||||| ||||||||||||||| |||||| |||
Sbjct 25984433 GGGGCAAGTGTTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGT 25984385
Score = 100 bits (110), Expect = 7e-19
Identities = 130/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 229 GAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTG 288
|||||||| | |||| || |||||| | | || |||||| || ||||||| |
Sbjct 105341116 GAACACCAACGACGAAAGCACTCTGCTGGGCCGACACCGACACTAAGAGACGAAAGCTAG 105341175
Query 289 GGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGT 348
||||||||| |||||||| |||| ||||||| ||||||||||||| |||||||||||
Sbjct 105341176 GGGAGCAAATGGGATTAGAGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGT 105341235
Query 349 CGGGGCGCATAAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | | | | | |||| ||| ||||| ||||||| || ||| |||||||
Sbjct 105341236 TGTGCGACTCGACCCGTGCAGTGCTATAGCTAACGCGTTAAGTATCCCGCCTAGGGAGTA 105341295
>seq2
Length=244442276
Score = 233 bits (258), Expect = 5e-59
Identities = 297/405 (73%), Gaps = 3/405 (1%)
Strand=Plus/Plus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64
|||||| |||| ||||||||| ||||||||| ||||| ||| || ||| || |||
Sbjct 98047086 TGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAACCGCGTTAAGACTGAGGATGCAAGC 98047145
Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124
|||||||||||| | ||||||||||| || |||||||| || | ||||| | || |||
Sbjct 98047146 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCTGTCAAA 98047205
Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184
| | |||||||||| || || | |||||| | ||| |||| | |||||||
Sbjct 98047206 TCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTATGGTAGGGGCA 98047265
Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244
|||||| | |||| ||||||||||||| | || || | | |||||||| || ||
Sbjct 98047266 GACGGAATTTCCAGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGGAAAA 98047325
Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304
|| |||||| | | | |||||||||| | ||||| |||||||||| |||||
Sbjct 98047326 AGCACTCTGCTGGGCCGACATTGACACTGAGAGAC-AAAGCTAGGGGAGCAAATGGGATT 98047384
Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCG-CATAAGTG 363
||| |||| ||||||| ||||||||||||| |||||||||| | | ||| | |
Sbjct 98047385 AGAGACCCCCGTAGTCCTAGCCGTAAACGATGGATACTAGGTG-CTGTGCGACTCGACCC 98047443
Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | |||| | ||| ||||| ||||||| || |||||||||||
Sbjct 98047444 GTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 98047488
Score = 100 bits (110), Expect = 7e-19
Identities = 82/100 (82%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64
|||||| |||| ||||||||| ||||||||||||||||||| || ||| || |||
Sbjct 14974741 TGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGC 14974800
Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGT 104
|||||||||||| | |||| |||||| || |||||||||
Sbjct 14974801 GTTATCCGGAATGATTGGGTGTAAAGCGTCTGTAGGTGGT 14974840
>seq10
Length=150982314
Score = 208 bits (230), Expect = 2e-51
Identities = 258/351 (74%), Gaps = 8/351 (2%)
Strand=Plus/Plus
Query 62 AGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTG 121
|| |||||||| ||| | ||||||||||| || |||||||| || | ||||| | ||
Sbjct 51055912 AGTGTTATCCGAAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGTC 51055971
Query 122 AAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGG 181
||| | | |||||||||| || || | |||||| | ||| |||| | | ||||
Sbjct 51055972 AAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGG 51056031
Query 182 GCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGC 241
||| |||||| | ||| ||||||||||||| | || || | | |||||||| |||
Sbjct 51056032 GCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGGC 51056091
Query 242 GAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGG 301
||| || |||||| | | |||||||||||| ||||||| |||||||||| ||
Sbjct 51056092 GAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGGG 51056151
Query 302 ATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAG 361
|||||| ||||| ||||||| ||||||||||||| ||||||||||| | ||| |
Sbjct 51056152 ATTAGAGACCCTAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGT-TGTGCG---ACT 51056207
Query 362 TGCTCCG----GTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| ||| ||| || ||| ||||| ||||||| || |||||||||||
Sbjct 51056208 CGACCCGTGTAGTGTCGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 51056258
Score = 170 bits (188), Expect = 5e-40
Identities = 214/291 (74%), Gaps = 2/291 (1%)
Strand=Plus/Plus
Query 119 GTGAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGA 178
|| ||| ||| |||||||||| || || | |||||| | |||||||| | | |
Sbjct 48844860 GTCAAATCCTAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTAGAGTACGGTA 48844919
Query 179 GGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGT 238
|||||| |||||| | ||| ||||||||||||| | || || | | ||||||||
Sbjct 48844920 GGGGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAAC 48844979
Query 239 GGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAAC 298
|||||| || |||||| | | |||| ||||||| ||||||| ||||||||||
Sbjct 48844980 GGCGAAAGCACTCTGCTGGGCCGACACTGGCACTGAGAGACGAAAGCTAGGGGAGCAAAT 48845039
Query 299 AGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCG-CA 357
|||||||| |||| ||||||| ||||||||||||| |||||||||| | | ||| |
Sbjct 48845040 GGGATTAGAGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTG-CTGTGCGACT 48845098
Query 358 TAAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | | |||| | ||| ||||| ||||||| ||||||||||||||
Sbjct 48845099 CGACCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCACCTGGGGAGTA 48845149
Score = 158 bits (174), Expect = 3e-36
Identities = 183/244 (75%), Gaps = 2/244 (1%)
Strand=Plus/Minus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64
|||||| |||| ||||||||| ||||||||||||||||||| || ||| || |||
Sbjct 48831506 TGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGC 48831447
Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124
|||||||||||| | ||||||||||| || |||||||| || | ||||| | || |||
Sbjct 48831446 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGTCAAA 48831387
Query 125 GGCTATGGCTCAACCCCGGGACTGCT-TTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGC 183
| | ||||||| ||| | || | | | |||||| | ||| |||| | | ||||||
Sbjct 48831386 TCCCAGGGCTCAA-CCCTGAACAGGTGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGC 48831328
Query 184 AAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGA 243
| |||||| | ||| ||||||||||||| | || || | | |||||||| |||||
Sbjct 48831327 AGAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGGCGA 48831268
Query 244 AGGC 247
| ||
Sbjct 48831267 AAGC 48831264
>seq3
Length=235667834
Score = 132 bits (146), Expect = 1e-28
Identities = 121/153 (79%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244
||||||||| | |||||| |||||||| |||||| | | |||||| ||| |||||
Sbjct 139010974 AGTGGAATTTCGTGTGTAGGGGTGAAATCAGTAGATCTACGAAGGAACGCCAAAAGCGAA 139010915
Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304
||| ||| |||| || ||| ||| || ||||||| |||||||| |||||||||
Sbjct 139010914 GGCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCGAAAGCATGGGGAGCGAACAGGATT 139010855
Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGA 337
||||||||| |||||||| ||||||||||||||
Sbjct 139010854 AGATACCCTAGTAGTCCATGCCGTAAACGATGA 139010822
>seq4
Length=246994605
Score = 87.8 bits (96), Expect = 4e-15
Identities = 94/122 (77%), Gaps = 2/122 (2%)
Strand=Plus/Plus
Query 288 GGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTG 347
|||||||||| |||||||| |||| ||||||| ||||||||||||| ||||||||||
Sbjct 61510146 GGGGAGCAAATGGGATTAGAGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTG 61510205
Query 348 TCGGGGCG-CATAAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAG 406
| | ||| | | | | |||| | ||| ||||| ||||||| || |||||||||
Sbjct 61510206 -CTGTGCGACTCGACCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAG 61510264
Query 407 TA 408
||
Sbjct 61510265 TA 61510266
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203196787456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |