Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zea_20mays_20[refseq_20GCF_5F000005005.2_202017-02-07] 267 sequences; 2,135,083,061 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq5 86.0 3e-11 >seq5 Length=223902240 Score = 86.0 bits (94), Expect = 3e-11 Identities = 100/133 (75%), Gaps = 18/133 (14%) Strand=Plus/Minus Query 122110 GGGCATCGCCTACCTCCACAGCCTGCGACCGGCCATCGTGCACCGCGACATCAAGCCCTC 122169 ||||||||||||||||||| ||| || || |||||||||||||||||||||||||| Sbjct 218493302 GGGCATCGCCTACCTCCACCGCC-GCCAC-----ATCGTGCACCGCGACATCAAGCCCTC 218493249 Query 122170 TAACCTGCTGGTGGACGTCAACGCCGAGGGCCAGCGCACCATCAAGGTGGCCGACTTTGG 122229 |||||||| | || || ||| | ||| ||| ||||| | |||||||| || Sbjct 218493248 CAACCTGCT------CATCGACTCCGGGCGCC-GCG-----TCAAGATCGCCGACTTCGG 218493201 Query 122230 CTTTGCCCACATC 122242 | | | || |||| Sbjct 218493200 CGTGGGCCGCATC 218493188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084731894292066