Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zizania_20latifolia_20[genbank_20GCA_5F000418225.1_202013-07-09]
4,522 sequences; 603,989,347 total letters
Query= AAMG01000567.1
Length=197
Score E
Sequences producing significant alignments: (Bits) Value
seq4190 87.8 2e-15
seq2035 87.8 2e-15
>seq4190
Length=2156036
Score = 87.8 bits (96), Expect = 2e-15
Identities = 86/110 (78%), Gaps = 1/110 (1%)
Strand=Plus/Plus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| ||||| | |||| |||||||||||| || |||| || | | ||| ||
Sbjct 1174463 TAAGGAACTCAGCAAAATAACCCCGTAACTTCGGGAGAAGGGGTGCCCCCTCGCAAAAGG 1174522
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
| || ||||| || ||| ||| || |||||||| |||||||||||| ||
Sbjct 1174523 G-GGTCGCAGTGACCAGGCCCAAGCGACTGTTTACCAAAAACACAGGTCT 1174571
>seq2035
Length=9416
Score = 87.8 bits (96), Expect = 2e-15
Identities = 86/110 (78%), Gaps = 1/110 (1%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| || | | ||| ||
Sbjct 4140 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCCCCTCGCAAAAGG 4081
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
| || ||||| || ||| || ||| |||||||| |||||||||||| ||
Sbjct 4080 G-GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 4032
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531176729788
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |