Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zizania_20latifolia_20[genbank_20GCA_5F000418225.1_202013-07-09]
4,522 sequences; 603,989,347 total letters
Query= AAMG01001851.1
Length=140
Score E
Sequences producing significant alignments: (Bits) Value
seq203 87.8 1e-15
seq423 86.0 4e-15
>seq203
Length=971741
Score = 87.8 bits (96), Expect = 1e-15
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || |||||||||| | ||
Sbjct 789838 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 789897
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| ||||||| | || ||| ||| |||||| | ||| |||| |||||||
Sbjct 789898 CTTTCGTCTCTGCTCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 789955
>seq423
Length=54918
Score = 86.0 bits (94), Expect = 4e-15
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 4 CTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTGCTT 63
|||||||||||||||||| |||||||||| || || |||||||||| | || |||
Sbjct 49760 CTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGACTT 49701
Query 64 TCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
||| ||||||| | || ||| ||| |||||| | ||| |||| |||||||
Sbjct 49700 TCGTCTCTGCTCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 49646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 351985077400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |