Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zizania_20latifolia_20[genbank_20GCA_5F000418225.1_202013-07-09]
4,522 sequences; 603,989,347 total letters
Query= AAMG01002055.1
Length=294
Score E
Sequences producing significant alignments: (Bits) Value
seq3687 80.6 4e-13
>seq3687
Length=463049
Score = 80.6 bits (88), Expect = 4e-13
Identities = 99/134 (74%), Gaps = 1/134 (1%)
Strand=Plus/Minus
Query 97 CAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCG 156
|| |||| ||||||| | ||||| || || ||||| |||||||| || || || ||
Sbjct 168579 CATGGAATGCTTCTTGG-GGAATATCAACAGACCCCACACGCTTCATACGCTTCTTCCCT 168521
Query 157 GCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCC 216
||||||||||||| |||| ||| || || | | || || || ||||| ||||||
Sbjct 168520 TCCTTTTGCTTCTCTAGCAACTTCTTTTTGCGAGTAATATCGCCACCATAGCACTTGGCC 168461
Query 217 AGTACGTTCTTTCT 230
|| || ||||||||
Sbjct 168460 AGGACATTCTTTCT 168447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 838362087552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |