Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zizania_20latifolia_20[genbank_20GCA_5F000418225.1_202013-07-09] 4,522 sequences; 603,989,347 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq3687 80.6 4e-13 >seq3687 Length=463049 Score = 80.6 bits (88), Expect = 4e-13 Identities = 99/134 (74%), Gaps = 1/134 (1%) Strand=Plus/Minus Query 97 CAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCG 156 || |||| ||||||| | ||||| || || ||||| |||||||| || || || || Sbjct 168579 CATGGAATGCTTCTTGG-GGAATATCAACAGACCCCACACGCTTCATACGCTTCTTCCCT 168521 Query 157 GCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCC 216 ||||||||||||| |||| ||| || || | | || || || ||||| |||||| Sbjct 168520 TCCTTTTGCTTCTCTAGCAACTTCTTTTTGCGAGTAATATCGCCACCATAGCACTTGGCC 168461 Query 217 AGTACGTTCTTTCT 230 || || |||||||| Sbjct 168460 AGGACATTCTTTCT 168447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838362087552