Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zostera_20marina_20[genbank_20GCA_5F001185155.1_202015-07-22]
2,228 sequences; 203,913,826 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq391 286 6e-75
seq950 251 1e-64
seq265 242 6e-62
seq903 235 9e-60
seq782 233 3e-59
seq1111 228 1e-57
seq982 226 5e-57
seq247 217 3e-54
seq1999 210 4e-52
seq943 199 7e-49
seq2091 149 1e-33
seq1349 149 1e-33
seq345 149 1e-33
seq297 149 1e-33
seq197 149 1e-33
seq47 149 1e-33
seq1624 140 6e-31
seq1 107 3e-21
>seq391
Length=1095
Score = 286 bits (316), Expect = 6e-75
Identities = 189/208 (91%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| || | || ||| ||||||||||||||||||||||||||||||
Sbjct 42 TACTAGGTTGAATTACTATCGCAGC-ACGATCATCAGTAGGGTAAAACTAACCTGTCTCA 100
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 101 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 160
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 161 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 220
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTAT 208
||||||||||||||||||||||| ||||
Sbjct 221 GAACGCTTGGCTGCCACAAGCCAATTAT 248
>seq950
Length=282259
Score = 251 bits (278), Expect = 1e-64
Identities = 176/199 (88%), Gaps = 1/199 (1%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| || | | ||| |||||||||||||||| |||||||||||||
Sbjct 26700 TACTAGGTTGAATTACTATCGCAAC-ACGATCATCAGTAGGGTAAAGCTAACCTGTCTCA 26758
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||| |||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 26759 CGACGGTCTAAACCCTGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 26818
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 26819 ATTCTTCTTCACAATGATAGGAAGAGCCGACATTGAAGGATCAAAAAGCAACGTCGCTAT 26878
Query 181 GAACGCTTGGCTGCCACAA 199
|||||||||||||||||||
Sbjct 26879 GAACGCTTGGCTGCCACAA 26897
Score = 242 bits (268), Expect = 6e-62
Identities = 174/199 (87%), Gaps = 1/199 (1%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| || | || ||| |||| |||||||| ||||||||||||||||
Sbjct 61248 TACTAGGTTGAATTACTATCGCAGC-ACGATCATTAGTAGGGTCAAACTAACCTGTCTCA 61306
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||| ||||||| |||||||| || ||||||||||||||| |||| ||
Sbjct 61307 CGACGGTCTAAACCCTGCTCACGCTCCCTATTGGTTGGTGAACAATCCAACACTTAGTGA 61366
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 61367 ATTCTTCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGTTAT 61426
Query 181 GAACGCTTGGCTGCCACAA 199
||||||||| |||||||||
Sbjct 61427 GAACGCTTGACTGCCACAA 61445
Score = 199 bits (220), Expect = 7e-49
Identities = 130/143 (91%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 57 CTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTA 116
|||| ||||||||||||||| ||||||||||||||| |||||||||||||||||| |||
Sbjct 57336 CTCACGACGGTCTAAACCCAACTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTG 57395
Query 117 CCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCG 176
||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 57396 GTGAATTCTTCTTCACAATGATAGGAAGAGCAGACATCGAAGGATCAAAAAGCAACGTCG 57455
Query 177 CTATGAACGCTTGGCTGCCACAA 199
|||||||| ||||||||||||||
Sbjct 57456 CTATGAACACTTGGCTGCCACAA 57478
>seq265
Length=12750
Score = 242 bits (268), Expect = 6e-62
Identities = 174/199 (87%), Gaps = 1/199 (1%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| || | | ||| |||||||||||||||||| || ||||||||
Sbjct 8883 TACTAGGTTGAATTACTATGGCAAC-ACGATCATCAGTAGGGTAAAACAAATCTGTCTCA 8941
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||| ||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 8942 CGACGGTCTAAACCCAACTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 9001
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 9002 ATTCTTCTTCACAATGATAGGAAGAGCAGACATCGAAGGATCAAAAAGCAACGTCGCTAT 9061
Query 181 GAACGCTTGGCTGCCACAA 199
|||| ||||||||||||||
Sbjct 9062 GAACACTTGGCTGCCACAA 9080
>seq903
Length=232632
Score = 235 bits (260), Expect = 9e-60
Identities = 162/182 (89%), Gaps = 1/182 (1%)
Strand=Plus/Minus
Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
||||||| || | || | |||||||||||||||||||||||||||||||| |||||||
Sbjct 41452 GAATTACTATCGCAGC-ATGGTCATCAGTAGGGTAAAACTAACCTGTCTCACCACGGTCT 41394
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129
||| |||||||||||| |||||| |||||||||||||||||| ||| |||||||||||
Sbjct 41393 AAATCCAGCTCACGTTTCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTT 41334
Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189
| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct 41333 CACAATGATAGGAAGAGCCGATATCGAAGGATCAAAAAGCAACTTCGCTATGAACGCTTG 41274
Query 190 GC 191
||
Sbjct 41273 GC 41272
Score = 230 bits (254), Expect = 4e-58
Identities = 165/189 (87%), Gaps = 1/189 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | |||||||||||| | ||| |||| ||||||||||||||||||| || ||
Sbjct 39482 TACTAGGTTGAATTACCATTGTAGT-ACGATCATTAGTAGGGTAAAACTAACCTTTCACA 39424
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||| |||||||||||| |||| |||| ||||||||||||| ||| ||
Sbjct 39423 TGACGGTCTAAACCTAGCTCACGTTCCTTATTGGTGGATGAACAATCCAACACTTGGTGA 39364
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 39363 ATTCTGGTTCACAATGATAGGAAGTGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 39304
Query 181 GAACGCTTG 189
|||||||||
Sbjct 39303 GAACGCTTG 39295
Score = 181 bits (200), Expect = 2e-43
Identities = 141/168 (84%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 27 ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTC 86
||| |||| ||||| ||||||||||| ||| ||| ||||||||| ||||| |||||||||
Sbjct 42532 ACGATCATGAGTAGAGTAAAACTAACTTGTTTCACGACGGTCTATACCCAACTCACGTTC 42473
Query 87 CCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAG 146
| |||| ||| | |||||||||||| ||| ||||||| |||| |||| || || |
Sbjct 42472 CATATTGGTGTGCGAACAATCCAACACTTGGTGAATTCTACTTCACAATGACAGTAATTG 42413
Query 147 CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGC 194
|||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 42412 CCGACATCAAAGGATCAAAAAGCAACGTCGCTATGAACGCTTTCCTGC 42365
>seq782
Length=294904
Score = 233 bits (258), Expect = 3e-59
Identities = 167/191 (87%), Gaps = 1/191 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | |||||||| || | | | | |||||||||||||||||||||| ||| |||
Sbjct 94229 TACTAGGTGGAATTACTATCGCATC-ATGATCATCAGTAGGGTAAAACTAACATGTTTCA 94171
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||||||| |||||| |||||||||||||||||| ||| ||
Sbjct 94170 TGACGGTCTAAACCCAGCTCACGTTTCCTATTGGTGGGTGAACAATCCAACACTTTGTGA 94111
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 94110 ATTCTGCTTCACAATGATAGGAAGAGCCGGCATCGAAGGATCAAAAAGCAACGCCGCTAT 94051
Query 181 GAACGCTTGGC 191
||| |||||||
Sbjct 94050 GAATGCTTGGC 94040
Score = 210 bits (232), Expect = 4e-52
Identities = 162/191 (85%), Gaps = 1/191 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| || | || ||| |||||||||| ||||||||||||||||| |
Sbjct 80062 TACTAGGTTGAATTACTATCGTAGC-ACGATCATCAGTAGTGTAAAACTAACCTGTCTAA 80004
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
| |||||||||||||||||||||||||||| |||| ||||||||||||| ||| |
Sbjct 80003 CAATGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGCTGAACAATCCAACACTTGGTAA 79944
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| ||||||||||| || ||||||||||||| ||||| ||||||||||||
Sbjct 79943 ATTCTGCTTCACAATGATAGGAAGTGCTGACATCGAAGGATAAAAAAACAACGTCGCTAT 79884
Query 181 GAACGCTTGGC 191
||||| |||||
Sbjct 79883 GAACGATTGGC 79873
Score = 210 bits (232), Expect = 4e-52
Identities = 162/191 (85%), Gaps = 1/191 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| || | | | | |||||| ||||||||||||||||| ||||
Sbjct 83165 TACTAGGTTGAATTACTATCGCATC-ATGATCATCAATAGGGTAAAACTAACCTTTCTCG 83107
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||| ||||||||| |||||||||| ||||| |||||||||||||||||| ||| ||
Sbjct 83106 CGACAGTCTAAACCTAGCTCACGTTTCCTATGGGTGGGTGAACAATCCAACACTTTGTGA 83047
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 83046 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCACTAT 82987
Query 181 GAACGCTTGGC 191
||||||||||
Sbjct 82986 AAACGCTTGGC 82976
Score = 190 bits (210), Expect = 3e-46
Identities = 140/162 (86%), Gaps = 1/162 (1%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||| || |
Sbjct 84600 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAATCCAGCTCACGTTTCCCA 84541
Query 91 TTAGTGGGTGA-ACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149
|| |||| || |||||||||| || |||||||||||| |||||||||||| | |
Sbjct 84540 TTGGTGGATGTGACAATCCAACAATTTGTGAATTCTGCTTCACAATGATAGGAAGAACTG 84481
Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 191
|||| ||| || |||||||||||||||||||||||||||||
Sbjct 84480 ACATTGAAAAATAAAAAAGCAACGTCGCTATGAACGCTTGGC 84439
Score = 188 bits (208), Expect = 1e-45
Identities = 157/191 (82%), Gaps = 1/191 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| || | | | | ||||| |||||||||||||||||||||| |
Sbjct 85837 TACTAGGTTGAATTACTATCGCATC-ATGATCATCTGTAGGGTAAAACTAACCTGTCTTA 85779
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||| ||||||| ||||||||||||||| |||||||| ||| ||
Sbjct 85778 CGACGGTCTAAACCCAGATCACGTTTACTATTAGTGGGTGAATAATCCAACACTTTGTGA 85719
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| ||| || ||||| || ||||| || |||||||||||||||||| |||
Sbjct 85718 ATTCTGCTTCACAATGGTAAGAAGATCCAACATCAAAAGATCAAAAAGCAACGTCGTTAT 85659
Query 181 GAACGCTTGGC 191
|||| |||||
Sbjct 85658 AAACGTTTGGC 85648
Score = 132 bits (146), Expect = 8e-29
Identities = 116/143 (81%), Gaps = 1/143 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| || | || ||| ||| ||||||||||||||||||||| |||
Sbjct 94532 TACTATGTTGAATTACTATCGTAGC-ACGATCACTAGTAGGGTAAAACTAACCTGTTTCA 94474
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||| ||||||||||| ||||| || |||||||||| ||| ||| ||
Sbjct 94473 CGACGGTCTAAACACAGCTCACGTTTCCTATCGATGAGTGAACAATCTAACTCTTGGTGA 94414
Query 121 ATTCTGCTTCGGTATGATAGGAA 143
|||||||||| ||||||||||
Sbjct 94413 ATTCTGCTTCACAATGATAGGAA 94391
Score = 131 bits (144), Expect = 3e-28
Identities = 95/110 (86%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||| |||||||||||||||||||||| |||||||||||||| |||||| ||| ||||
Sbjct 81927 TCATCAATAGGGTAAAACTAACCTGTCTCGTGACGGTCTAAACCTAGCTCATGTTTCCTA 81868
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAG 140
| ||||||||||||||||| ||| |||||||||||| |||||||
Sbjct 81867 TAGGTGGGTGAACAATCCAATACTTTATGAATTCTGCTTCATAATGATAG 81818
Score = 93.3 bits (102), Expect = 7e-17
Identities = 54/56 (96%), Gaps = 0/56 (0%)
Strand=Plus/Minus
Query 136 GATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 191
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 81138 GATAGGAAGAACCGGCATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 81083
>seq1111
Length=162390
Score = 228 bits (252), Expect = 1e-57
Identities = 167/193 (87%), Gaps = 1/193 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| || | || | | |||| |||||||||||||||||||||||||
Sbjct 88290 TACTAGGTTGAATTACTATCGCAGC-ATGATCATTAGTAGGGTAAAACTAACCTGTCTCA 88232
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||| |||||||||||||||||||||| |||||||||||||||||| || ||
Sbjct 88231 CGACGGTCTTAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTAGGTGA 88172
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| ||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct 88171 ATTCTGCTTCACAATGATAGGAAGAGGCGACATCGAAGAATCAAAAAACAACGTCGCTAT 88112
Query 181 GAACGCTTGGCTG 193
||| |||||||||
Sbjct 88111 GAATGCTTGGCTG 88099
>seq982
Length=1523811
Score = 226 bits (250), Expect = 5e-57
Identities = 165/190 (87%), Gaps = 1/190 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| || | || ||| ||||||||||||||||||||||||||||||
Sbjct 1239294 TACTAGGTTGAATTACTATCGCAGC-ACGATCATCAGTAGGGTAAAACTAACCTGTCTCA 1239236
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||| |||| || ||||||||||||||| ||| ||
Sbjct 1239235 CGACGGTCTAAACCCAGCTCACGTTTTTTATTGGTAGGTGAACAATCCAACACTTGGTGA 1239176
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1239175 ATTCTGCTTCACAATGTTAGAAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 1239116
Query 181 GAACGCTTGG 190
||||||| ||
Sbjct 1239115 GAACGCTGGG 1239106
Score = 221 bits (244), Expect = 2e-55
Identities = 173/206 (84%), Gaps = 8/206 (4%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| || | || ||| ||||||||||||||||||||||||||||||
Sbjct 1236168 TACTAGGTTGAATTACTATCGCAGC-ACGATCATCAGTAGGGTAAAACTAACCTGTCTCA 1236110
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||| |||| || ||||||||||||||| ||| ||
Sbjct 1236109 CGACGGTCTAAACCCAGCTCACGTTTTTTATTGGTAGGTGAACAATCCAACACTTGGTGA 1236050
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCG---- 176
|||||||||| ||| ||| |||||||||||||||||||||||||||||||||||
Sbjct 1236049 ATTCTGCTTCACAATGTTAGAAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAC 1235990
Query 177 ---CTATGAACGCTTGGCTGCCACAA 199
||||||||||||| |||||| ||
Sbjct 1235989 CAACTATGAACGCTTGACTGCCATAA 1235964
>seq247
Length=472893
Score = 217 bits (240), Expect = 3e-54
Identities = 157/177 (89%), Gaps = 7/177 (4%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 82853 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCTAGCTCACGTTCCCTA 82794
Query 91 TTAGTGGGTGAACAATCCAACGC-TTACCGAATTCTGCTT--CGGTATG--ATAGGAAGA 145
|| |||||||||||||||||| | || |||||| | || | ||| | |||||||||
Sbjct 82793 TTGGTGGGTGAACAATCCAACACTTTGGTGAATTCGGTTTCACAGTACGATATAGGAAGA 82734
Query 146 GCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGC--TTGGCTGCCACAAG 200
| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct 82733 GACGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTTTGGCTGTCACAAG 82677
Score = 89.7 bits (98), Expect = 9e-16
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271
|||||||||||||||| |||| ||||| |||||| ||| | |||||||||||||||||
Sbjct 82490 TGTGGTAACTTTTCTGACACCCCTAGCTTCAAATCCCGAAGATCTAAAGGATCGATAGGC 82431
Query 272 CACACTTTCATG 283
||| ||||||||
Sbjct 82430 CACGCTTTCATG 82419
>seq1999
Length=638737
Score = 210 bits (232), Expect = 4e-52
Identities = 157/183 (86%), Gaps = 1/183 (1%)
Strand=Plus/Minus
Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
||||||| || | || ||| | |||||||||||||||||||| ||||||| ||||||||
Sbjct 29984 GAATTACTATCGCAGC-ACGATTATCAGTAGGGTAAAACTAACTTGTCTCACGACGGTCT 29926
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129
||||||| ||||||||||||||| ||| |||||||||||| ||| ||||||||||
Sbjct 29925 AAACCCATCTCACGTTCCCTATTGCTGGATGAACAATCCAATACTTGATGAATTCTGCTC 29866
Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189
| ||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 29865 CATAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGTTACTGACGCTTG 29806
Query 190 GCT 192
|||
Sbjct 29805 GCT 29803
>seq943
Length=221707
Score = 199 bits (220), Expect = 7e-49
Identities = 142/163 (87%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 27 ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTC 86
||| |||||||||||||||||||||||| || || |||||||||||| |||||||||||
Sbjct 26148 ACGATCATCAGTAGGGTAAAACTAACCTTTCACACAACGGTCTAAACCTAGCTCACGTTC 26089
Query 87 CCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAG 146
|||||| | || ||||||||||||| ||| ||||| || ||| ||||||||||| |
Sbjct 26088 CCTATTGGGGGATGAACAATCCAACACTTGGTGAATTTTGGTTCACAATGATAGGAAGTG 26029
Query 147 CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189
||||||||||||||||||||||||||||| ||||||| |||||
Sbjct 26028 CCGACATCGAAGGATCAAAAAGCAACGTCACTATGAATGCTTG 25986
>seq2091
Length=1324
Score = 149 bits (164), Expect = 1e-33
Identities = 97/107 (91%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 187 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 246
||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 974 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATC 1033
Query 247 TCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
||| | |||||||||||||||||||| |||||| |||| ||||||
Sbjct 1034 CCGAAGATCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 1080
>seq1349
Length=2249
Score = 149 bits (164), Expect = 1e-33
Identities = 97/107 (91%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 187 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 246
||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 195 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATC 136
Query 247 TCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
||| | |||||||||||||||||||| |||||| |||| ||||||
Sbjct 135 CCGAAGATCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 89
>seq345
Length=8943
Score = 149 bits (164), Expect = 1e-33
Identities = 97/107 (91%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 187 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 246
||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 8717 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATC 8776
Query 247 TCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
||| | |||||||||||||||||||| |||||| |||| ||||||
Sbjct 8777 CCGAAGATCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 8823
>seq297
Length=1043
Score = 149 bits (164), Expect = 1e-33
Identities = 97/107 (91%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 187 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 246
||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 154 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATC 95
Query 247 TCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
||| | |||||||||||||||||||| |||||| |||| ||||||
Sbjct 94 CCGAAGATCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 48
>seq197
Length=1203
Score = 149 bits (164), Expect = 1e-33
Identities = 97/107 (91%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 187 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 246
||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 256 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATC 197
Query 247 TCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
||| | |||||||||||||||||||| |||||| |||| ||||||
Sbjct 196 CCGAAGATCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 150
>seq47
Length=1552
Score = 149 bits (164), Expect = 1e-33
Identities = 97/107 (91%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 187 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 246
||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 211 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATC 152
Query 247 TCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
||| | |||||||||||||||||||| |||||| |||| ||||||
Sbjct 151 CCGAAGATCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 105
>seq1624
Length=1424072
Score = 140 bits (154), Expect = 6e-31
Identities = 95/107 (89%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 187 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 246
||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||
Sbjct 1348823 TTGGCTGCCACAAGCCAGTTATCGTTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATC 1348764
Query 247 TCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
||| | |||||||||||||||||||| |||||| |||| ||||||
Sbjct 1348763 CCGAAGATCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 1348717
>seq1
Length=2654544
Score = 107 bits (118), Expect = 3e-21
Identities = 88/107 (82%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 187 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 246
||| || ||||||||||||||||||| |||||||||||| | |||||||||| ||||||
Sbjct 117011 TTGACTTCCACAAGCCAGTTATCCCTTTGGTAACTTTTCCGACACCTCTAGCTTCAAATC 116952
Query 247 TCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| | ||||||||||||||||||| ||||| | || ||||||
Sbjct 116951 CTGGCGAGCTAAAGGATCGATAGGCCAAACTTTTACAATTCGTATTC 116905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854380963968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |