Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zostera_20marina_20[genbank_20GCA_5F001185155.1_202015-07-22] 2,228 sequences; 203,913,826 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq884 120 3e-22 >seq884 Length=234451 Score = 120 bits (132), Expect = 3e-22 Identities = 122/157 (78%), Gaps = 4/157 (3%) Strand=Plus/Plus Query 161008 CCCTACTCCTGTCGTGCTGGTGCTTGCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACT 161067 || ||||| ||||||||||| || |||||||||||||| || || ||||| ||||||| Sbjct 82072 CCATACTCTTGTCGTGCTGGAGCATGCTCTACTTGTGCAGGCAAACTTGAGTCTGGTACT 82131 Query 161068 GTAGATCAATCTGATCAATCTTTCCTGGATGATGATCAACTTGAATCA--GGATTTGTCC 161125 || || ||||||||| ||| ||||| |||||| ||| | || || || | ||||| Sbjct 82132 GTCGACCAATCTGATGGATCATTCCTTGATGATACTCAGAT--AAGCAATGGCTATGTCC 82189 Query 161126 TGACCTGCGTTGCTTATCCCACTTCTGATGTAACTAT 161162 | || |||||||| || || ||||| ||| | ||||| Sbjct 82190 TCACTTGCGTTGCATACCCTACTTCAGATATCACTAT 82226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551360644178400