Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zostera_20marina_20[genbank_20GCA_5F001185155.1_202015-07-22] 2,228 sequences; 203,913,826 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq1214 102 1e-16 >seq1214 Length=1562992 Score = 102 bits (112), Expect = 1e-16 Identities = 171/245 (70%), Gaps = 2/245 (1%) Strand=Plus/Plus Query 162615 CGGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGAT 162674 ||| ||||| ||||| ||||| || ||||| |||| |||| ||||| || | || || Sbjct 875871 CGGGATTCTCTTCAACCACGAGAGTCCACGCCGAGGGGAGAATTTCGTGACGAGGAAAAT 875930 Query 162675 CGTCCGAGCCTTGTCCCGAATTAGTGTGGGACTCCAAAGTGATCTACAACTTGGAAACCT 162734 | | |||| || |||| ||||| | |||||| | | | || ||||| Sbjct 875931 CACCAGAGCTGTGGGAAGAATCCAGATGGGATTGCAAAGTAAGTTGTTCTTGGGGAACCT 875990 Query 162735 CAATGCC-CGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGC 162793 | || ||| | || |||||| |||| |||||||| ||||| ||||||||||||| Sbjct 875991 GACAGCGTCGAGG-GATTGGGGATTCGCCGGGGACTACGTGGAGGCGATGTGGTTGATGC 876049 Query 162794 TTCAGCAAGAGAAGCCAGATGATTATGTGATCGCAACTGGTGAGCAGTATTCTGTAAAGG 162853 | ||||| |||||||| || || |||||| | || |||| ||| || |||| ||| Sbjct 876050 TACAGCAGGAGAAGCCTGACGACTATGTGGTGGCGACTGAGGAGAGCCATACTGTGGAGG 876109 Query 162854 ACTTT 162858 | ||| Sbjct 876110 AGTTT 876114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691439942861280